KEGG   Fragaria vesca (woodland strawberry): 101314546
Entry
101314546         CDS       T02666                                 
Name
(RefSeq) probable lysine--tRNA ligase, cytoplasmic
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    101314546
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:fve01007]
    101314546
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fve03016]
    101314546
Enzymes [BR:fve01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     101314546
Amino acid related enzymes [BR:fve01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   101314546
Transfer RNA biogenesis [BR:fve03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    101314546
 Prokaryotic type
   Other AARSs
    101314546
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d Imm5
Other DBs
NCBI-GeneID: 101314546
NCBI-ProteinID: XP_004294951
Position
LG3:complement(23330558..23334385)
AA seq 579 aa
MDAVRLWSLSSSHPLKQLIRTTTTRLVIRCCSSSSTRTAPKPGGRGRRLSTSTSTSDKDA
VRAIRLNKVQELRSKGLEPYAYSWERTHSANQLQDIYKHLGNGEESKPENDGVSIAGRIV
ARRAFGKLAFLTLRDDSGTIQLYCEKERLADDQFDQLKSLVDIGDIVGATGSIKRTEKGE
LSVYVNSFAVLTKSLLPLPDKYHGLTDVDKRYRQRYVDMIANPEVADVFRKRAKVVSEIR
KTVESFGFIEVETPVLQGAAGGAEARPFVTYHNSLGRDLYLRIATELHLKRMLVGGFEKV
YEIGRIFRNEGISTRHNPEFTTIEMYEAYSDYESMMNMTEEIVTRCALAVHGKLTLDYQG
VEIYLERPWRRETMHNLVKEATGITFNELGNDLQVAKEVTLKNLGADLDYKYKSSIEACS
SIGHLLNEVFEIVVEPKLVQPTFVLDYPIEISPLAKPHRRHAGLTERFELFICGRELANA
FSELTDPMDQRRRLEEQVRQHNEKRAAAISGIDSAEDKREETDESYEVTLDDDFLTALEY
GMPPASGMGLGIDRLVMLLTNSASIRDVIAFPVLKIQQQ
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggatgcggtgaggctatggagcctatcctcctcgcacccattgaaacaactaattcgc
acaaccaccactagacttgtcatccgctgctgctcttcctcttccactagaaccgccccc
aaacccggaggccgcggccgccgcttgtctacctcaacctccacctctgacaaagacgct
gttcgagccattcgcttaaacaaggtacaagagttgaggagcaaaggtttggagccatat
gcgtattcttgggaaaggactcactctgctaatcagctgcaagatatttacaagcattta
gggaacggtgaggagtccaagcccgaaaacgatggtgtctcaattgcaggcaggattgtg
gctcgcagagcttttggaaagcttgcatttttgacactcagggatgattccggtactatt
cagctttactgtgagaaggaacggcttgcagatgatcagtttgaccagttaaagtccctt
gttgatattggtgatatagttggtgctactggatccatcaagcgcacagagaaaggggag
ctgtctgtatatgtaaactcctttgcagttcttacaaaatctctactcccgctgccggac
aaatatcatggtctaactgatgtggacaagcgctatcgtcaacggtatgttgatatgatt
gcaaatcctgaggtagctgatgtattccggaaaagagcaaaggttgtatcagagatacgc
aagacagttgaatctttcgggtttattgaagttgaaactccagttctccagggagcagct
ggtggggcagaggctaggccatttgttacataccataattcacttggaagggacctgtat
ttgagaatagcaaccgagctccacttaaagagaatgctggttggggggtttgagaaggtg
tatgagattggacgaatattccggaatgaaggcatttcaactcgtcataatcctgaattt
accactatagagatgtatgaagcatattcagactatgaaagcatgatgaacatgacagag
gaaattgttacacgttgtgcacttgcagttcacgggaagcttacgcttgattaccagggg
gtggagatatatcttgagcgaccatggaggagggaaaccatgcacaatcttgtcaaagaa
gccactggaattactttcaatgagttaggcaatgaccttcaagttgctaaagaagttact
ctgaagaacctaggagctgaccttgattacaaatacaaatcttctattgaagcatgctcg
tctattggccaccttcttaatgaggtttttgagattgttgttgaaccaaagcttgtgcaa
cccacatttgttttagactatcctatcgagatatctcctctggccaagccacatcggagg
catgcagggttgactgagaggtttgagctttttatatgcggtcgtgagctggccaatgct
ttttctgaattgaccgatcccatggatcagagacggcgattagaagagcaagtaaggcag
cacaatgaaaagagagcagcagctatatcaggaatagatagtgcagaagataaaagagag
gaaactgatgagtcatatgaagtgactcttgatgatgattttcttacagctttggaatat
gggatgcctccagcttctggaatggggcttggaattgataggctagtcatgcttttaacg
aattccgccagcatcagagatgtaattgccttcccagtgctaaaaattcagcaacagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (32)   

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