KEGG   Fragaria vesca (woodland strawberry): 101314963
Entry
101314963         CDS       T02666                                 
Name
(RefSeq) lysine-specific demethylase JMJ25
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fve03036]
    101314963
Enzymes [BR:fve01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     101314963
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    101314963
SSDB
Motif
Pfam: WRC JmjC zf-4CXXC_R1
Other DBs
NCBI-GeneID: 101314963
NCBI-ProteinID: XP_004302409
Position
LG6:4944979..4951361
AA seq 965 aa
MDLRLGPGNGEDNLGIPDDMRCKRSDGKQWRCTARSMPDKTVCEKHYIQAKKRAANSALR
ANMKKAKRKPSGEGDLFLESKSDDFDVPLATKSDDVDVPLASIKSEEKSRPSHGKKFTKI
SKNQFRYSPDPPPMRSVPRRNLSNEERKSDEHEDDWSSYKSPPVSALDSPRNRPQRSFDA
NAMPVSESADGSSESSEDAGGQTCHQCRRKDDTVIWCHRCDRRGYCDSCIRTWYSNTPPE
DIQSSCPACSGTCNCKVCLRRDNLVKVRIREIPALDKLQYLHCLLSSVLPVVKQIHQEQC
FEVELEKKLRGSDIDLARTKLNADEQMCCNFCRIPIIDYHWHCPGCAYDVCLNCCLDLRE
ASKQVVKGEVTEEIDDESQEKETMLEQFAKVRLNFSEKFPDWKANSNGSIPCPPKEYGGC
GYSALSLSRIFKMNWVAKLVKNVEEMVSGCRVNDAASLALTEVNDKRLCQYAHREDSDNF
LYCPRSEDIKCDGIATFKRHWLRGEPIIVKRVFDSSTVSSWDPAVIWRGIQETTDEKSKD
QNRMVKAIDCYDWSEVDIELGHFIEGYSEGQIYENGRPKILKLRDWPSPSASEEFLLYQR
PEFIRKLPLLEYIHSKFGLLNVAAKLPHYSLQNDVGPKIFISYGTHEELDKGNSVTNLHF
NMRDMVYLLVHACVVKQKGQQKTKIENVQKPFEASEVKESHEDLVMGAGDSTFPDLSIDQ
SEENPYEARLDTDKVDSAVNHGLETTHVEMNTISCEHSEKEGDDISQKTHPGVLWDVFRR
KDVPKLTEYIRIHGEEFGKLKSETNDLVTRPLYDETCFLNEHHKRKLKEEFGVEPWSFEQ
NLGQAVFIPAGCPFQVRNLQSTVQLGLDFLSPESLGDAARLAEEIRCLPNDHEAKQQVSE
VGQGKFYVEVGKISLYAASSAIKEIQRLVLDPKFSGELGFEDPNLTAAVSENLEKITKRR
QIACS
NT seq 2898 nt   +upstreamnt  +downstreamnt
atggacctacgtttaggccctgggaatggcgaggataatcttggcattcctgatgatatg
cgatgcaagagatcggatgggaaacagtggaggtgcacggccaggtctatgccagataaa
acagtatgtgagaagcactatatccaggcaaagaagagggcagctaattctgcactgcgc
gctaatatgaaaaaagccaagagaaaaccgtcaggcgaaggtgatcttttcttggagagt
aagagtgatgattttgatgtgccactggcaactaagagtgatgatgttgatgtgccactg
gcaagtatcaaatcagaggagaaatctcgtccatcccatgggaaaaagttcaccaagata
tcaaaaaaccagtttcgttattcacctgatccaccgcctatgagaagtgtgcctaggcgt
aatctttcaaatgaagagagaaaatcagacgagcatgaggatgattggagttcttataaa
tcaccacctgtttctgctttggactcacccaggaataggccacaaagaagttttgatgct
aatgctatgccagtttcggaatccgctgatggaagctcagaatcctctgaagatgctggt
ggtcaaacttgccatcagtgccggaggaaggatgacacagtcatctggtgccacagatgt
gatagacgagggtactgtgatagttgtattcgtacatggtattcaaacaccccaccggaa
gatattcagagctcttgtcctgcatgttctggtacctgtaattgcaaagtgtgccttcgt
agagacaatttagtaaaggtaaggatcagagagattcctgctctagacaagttgcaatat
ctccactgtctgctgtcttccgtgctcccagtggttaagcaaatccatcaagaacagtgc
tttgaagttgaactcgaaaaaaagcttcgtggaagtgatatagatcttgccaggacaaaa
ctgaatgcagatgagcagatgtgctgcaatttctgtagaattcccatcattgattatcat
tggcattgtcccggttgtgcttatgatgtgtgccttaactgctgtcttgatcttcgagaa
gcatctaagcaagtggtcaaaggagaagtgacagaggagattgatgatgaaagtcaagaa
aaagaaaccatgcttgagcagtttgccaaagtcagactaaatttttcggaaaagttccct
gactggaaagcaaatagtaatggcagtattccttgccccccaaaggagtatggtggctgt
ggatattcagcattgagtttaagtcgtatatttaagatgaactgggttgcaaagcttgtc
aagaatgtagaggaaatggttagtggctgtagagttaatgatgctgccagtcttgcgctc
actgaagttaatgataaaagactttgtcagtatgcccatagagaggacagtgacaatttc
ttgtactgtcctagatctgaggatattaaatgtgatgggattgccacttttaaaagacat
tggctcaggggtgagcccatcattgtaaagcgggtatttgatagctcaacagtttcaagc
tgggatcctgcggttatatggagagggattcaggaaacaacagatgaaaaatcgaaagat
caaaacagaatggtgaaggctatcgattgctatgactggtctgaggtagatattgagctt
ggtcacttcatcgaaggatactctgagggacaaatttatgaaaatggtcggccaaagatt
ttaaaattgagagactggccctctcccagtgcatctgaagagtttctcttgtatcagaga
cctgaatttatcaggaaactgcctttacttgagtatatccactccaagtttggtctttta
aatgttgctgcaaaattgccacattattcattgcaaaatgatgtgggacctaagattttc
atatcttatgggacccatgaggagcttgataaaggcaattccgtgaccaatcttcatttc
aacatgcgtgacatggtctatttgctggtgcatgcatgtgtggtgaagcaaaaaggtcag
cagaagacaaaaattgagaatgtgcaaaaacccttcgaggcatctgaggttaaagaatct
catgaggatctggtaatgggtgctggagacagtacattccctgatctatcaatagatcag
agtgaggaaaatccatatgaggcaagattggatacagataaagttgatagtgcagttaat
catgggcttgaaactactcatgttgaaatgaataccatcagttgtgaacactcagagaaa
gagggtgatgatatctctcaaaagactcatccgggagttctttgggatgttttccgtcga
aaggatgttccaaagctgaccgagtatataagaatacatggggaagaattcgggaaactg
aagagtgaaacaaatgaccttgtgacaagacctctttatgatgaaacatgtttcctgaat
gaacatcataaaagaaaattgaaggaagaattcggggtagagccatggtcctttgaacag
aatttggggcaagcggtattcattcctgctggatgcccatttcaagtcaggaatcttcag
tccaccgttcagctgggtcttgatttcttatctcctgaaagcctcggtgacgccgcaaga
ctggctgaagaaattcgctgtcttccaaatgatcatgaagcaaagcaacaagtgtcggag
gtcggacaagggaaattttacgtagaagtaggaaagatatcactttatgcagcaagctca
gctattaaagaaattcagagattggtacttgatccgaaattcagtggagagcttgggttt
gaagatccaaatttgactgcagcagtttctgagaatttggagaaaattactaagcgaaga
cagatagcatgttcttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (54)   
   KEGG ORTHOLOGY (1)   
   RefGene (50)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (66)   

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