KEGG   Fusarium verticillioides: FVEG_01821
Entry
FVEG_01821        CDS       T04869                                 
Name
(RefSeq) transcription initiation factor TFIIH subunit 4
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
fvr  Fusarium verticillioides
Pathway
fvr03022  Basal transcription factors
fvr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fvr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    FVEG_01821
  09124 Replication and repair
   03420 Nucleotide excision repair
    FVEG_01821
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fvr03021]
    FVEG_01821
   03400 DNA repair and recombination proteins [BR:fvr03400]
    FVEG_01821
Transcription machinery [BR:fvr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     FVEG_01821
DNA repair and recombination proteins [BR:fvr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     FVEG_01821
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 30060076
NCBI-ProteinID: XP_018744838
UniProt: W7M151
Position
6:complement(3115653..3117654)
AA seq 496 aa
MSVSPAPSLQLAEYLEKLPGTTFRKLYQQPSTAFAIFRRMLPHLAKTFVMRILYSPKPTL
LSDLDDWVKPSHKRQKDQALSILRVLHIVSITAPSKERPQEMQLTTNFKLSLRLALSGGG
THNSFGVPSTLQIPPEIDITFLDRYARKKWEDILHFVVSSVGYKSAGESSGPNKSVKELL
VAGRLVDRKASGSVGITQAGFTFLLQEANAQVWTLLLLWLEAMEVNKMAGLEATDMLSFL
FVLASMELGRAYDTNALTEQRKNMLPSLVDFGLIYIPNHKRSMFFPTRLATTLTSSSNSL
RSISDGVAAATAAALQPGQSGAPGGSVTAANTEQRGSVIIETNYRIYAYTQSTLQIAVLA
LFTKLAMRFPDMVAGRISRQSIRQAIQFGITAEQIISYLSAHAHDQMHRTAALNNKPVLP
PTVVDQIRLWQLENERMKTTSGFLFKSFEDDREYKDISRFAEEVGVLVWKNDARQMFFAS
KHEQIRDYMKIRKKTE
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgtcagtcagcccagcgccctccctccagctcgcggagtatctcgagaaactccccggc
acgacctttcgcaagctctaccaacaaccctcaaccgcgttcgccatcttccgtcgcatg
ctaccgcacctcgcaaagacctttgtcatgcgcattctctactctcccaaacctacactc
ctcagcgatctagacgactgggtcaaaccgagccataagcgccagaaggaccaggcgctc
tcgatcttgcgcgttctgcacatcgtctcgatcacggcgccttcaaaggaacgaccgcag
gaaatgcaacttactacgaacttcaagctatcccttcgactcgcgctatcaggcggtggc
acacataactccttcggtgtaccgtcaacacttcaaatcccccccgaaatcgacatcacc
tttctcgatcgctacgcacgaaagaaatgggaagatatcctgcactttgtcgtatctagt
gtcggctacaagagcgccggcgagtcttctggaccgaataagagcgtgaaagaactcctc
gtcgcgggccgtctcgtcgatcgtaaagccagtggtagcgttggcatcacacaggctggt
tttacctttttgctgcaagaggccaacgcgcaagtatggacgctgctgttgctttggctg
gaggctatggaggtgaataagatggctgggctggaggctacagatatgctctcgttcctc
ttcgtgctcgccagcatggaactcggtcgcgcgtacgacacgaatgcgctgacggagcaa
cgtaagaacatgctaccctcacttgttgacttcgggttgatttacatccctaatcacaaa
cgatccatgttcttcccgactcgtctagctacaaccctcacttcgagcagcaatagtctt
cgcagcattagtgatggcgttgcagccgcgacggcagctgctcttcagccaggccaatct
ggcgcaccagggggcagcgtgacagccgccaataccgagcagcgcggcagtgtgattatc
gagactaactaccgtatctatgcctacactcagtcaacacttcaaatcgcggtcctcgct
ctcttcaccaaactcgcgatgcgcttccccgacatggtcgccggccgaatctcccgccaa
tccattcgacaagccattcaattcggcatcaccgccgagcagatcatatcctacctttcc
gcacacgcacacgatcaaatgcaccgcaccgcagctctcaataacaaacccgttcttccc
ccaacagtagtcgatcaaattcgtctatggcagctcgaaaacgagcgtatgaagacaaca
agcgggtttctgttcaagtccttcgaggatgatagggaatacaaggatatctcaagattt
gccgaggaggtgggtgttttggtgtggaagaacgatgctcgacagatgttttttgcgagc
aagcacgaacagattagagactatatgaagattcgcaagaagacagaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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