KEGG   Fusarium verticillioides: FVEG_15019
Entry
FVEG_15019        CDS       T04869                                 
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN2
  KO
K12571  PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
Organism
fvr  Fusarium verticillioides
Pathway
fvr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fvr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FVEG_15019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fvr03019]
    FVEG_15019
Enzymes [BR:fvr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     FVEG_15019
Messenger RNA biogenesis [BR:fvr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FVEG_15019
  mRNA degradation factors
   3'-5' decay
    Pan complex
     FVEG_15019
SSDB
Motif
Pfam: UCH_1 PAN2_N RNase_T UCH
Other DBs
NCBI-GeneID: 30071895
NCBI-ProteinID: XP_018745694
UniProt: W7LJF5
Position
6:complement(1508240..1512996)
AA seq 1137 aa
MDGDWAEVTRIPFPPPGVHAMPTPVATMTFDNSQELLWTGNEYGRVTSFYGTELQRYTSF
KAHASSDGPIRQILVNEKGIVSLGAKDMHMAIRRGLPIWHIRHDDMKDLRCMSFTSKGTA
EVIAAGMQDTMLVIDLIKGDVVKQVPTEHQYTIMRRGRYICAATQTGSVNLLDPVTFAVI
KSWNAHSALINDMDAQHDFIVTCGYSLRQGQNYMLDPFLNVFDIKKMSSMPPIPFPAGAA
YVRMHPRMLTTSIVVSQSGQMHVVDLMNPNTSDVRLANVTSYLSMFEIAPSGEAIALTDA
DCSIHLWGSPTKLHFVDLPTPIEFATPEEPLPNIDWGPDTPLNMIGLPHYREALASAWPD
IPCDVGAPPVKFDPQFLAGLKPTEFGMYGRNTRGLRRNQAENTRNVNKSGSSGLKAPKFL
SEKARELATSNAAASDKKADELISSLTDMGLESKKSDVPVMYRTVEIKYSKFGVDDFDFG
FYNNTRYSGLETHISNSYANSLLQIMHFTPVIRNLALQHAATSCVSEICLLCELGFLFDM
LQKAEGSICQATNLLKTLSNHPQAGPLGLLEEDPHGSSLNVMLQGLTRFLLDKIVHDYRT
INPSSTAMDQVLATSATTSIRCINCRSEYTRPGSTYVNDLLYPSPAGSRNAKLPRISFSQ
VLKNSVERETTSKGWCSRCQRYQTIATRKSIHSIPAVLMLNTAITNQDQRMLWSTPGWLP
EEIGIIVEQGQFFCYEGEDLKLHLQRGIHNIAVYSLTGMAINIESGQSQKSHLVSMVNVA
HAEPEAPGESRWHLFNDFLVRSVSTEEALAFNTSWKVPSVIAYQIRDENNKIDTEWRSNI
DTSILYQDFNANADPSTKTYQVLNPETEAPGPNTIIALDTEFVAVRQPEIEMNSDGERET
IRPIVYALARASVVRGQGENEGTPFIDDYINIKEPIVDYLTSYSGITEQDLDPRVSKHSL
LSLKMAYKKMWILLNLGCKFLGHGLKQDFRVINIHIPKSQVIDTIDLFFLQTRLRRLSLA
FLAWYLLKEDIQMETHDSIEDSRTALKLYKKYLEFQDAGILETILQDIYRAGREVNFKPP
RKDGQHIPRTDTPPPLPVDGSTGPVTPVRSHNILAQTPGSAFGGGSSWTPGKGSPLP
NT seq 3414 nt   +upstreamnt  +downstreamnt
atggacggcgattgggctgaggtcacccggattccgttcccgcctccgggcgtgcacgcg
atgcccactccggttgcgactatgaccttcgataactctcaggaacttctttggacaggc
aacgaatatggtcgagtcacttccttctatgggaccgaattgcagcgatatacctctttc
aaggcccatgcctcctctgatggcccgattcgtcaaatactcgtcaatgagaaaggaatt
gtttccctcggtgctaaagatatgcatatggccattcggagaggactacctatatggcat
attagacatgacgatatgaaagatttgcgatgtatgagctttacgtctaagggaacggca
gaggttatcgctgcaggaatgcaagacacgatgcttgtcattgacctcattaagggtgat
gttgtcaaacaagtgcctaccgaacaccagtacacaataatgagacgcgggcgatatata
tgcgccgcaactcagaccggttccgtcaacttactggatcctgtcacttttgctgtcatc
aagtcttggaacgcgcactctgctttgattaatgacatggacgctcagcatgacttcatc
gtaacttgcggatactccttaagacagggtcagaattacatgcttgacccgttccttaac
gtcttcgatataaagaagatgtcatcgatgccccctattcctttcccagctggcgctgcc
tacgtgcgcatgcacccgaggatgttgacgaccagcatcgttgtctcacaaagtggacaa
atgcatgttgttgacttaatgaatcccaacacaagcgacgtacggttggctaatgttact
tcctacttgagcatgtttgagattgcaccctctggcgaggcgattgccctcacagatgct
gattgctcgattcacctttggggatccccaacaaaactccatttcgtggacttaccaact
ccgatcgaattcgcaactcccgaagagcccctgcccaatattgactggggcccagataca
cccctgaacatgatcggattgccgcattatcgagaggctctggcatccgcctggccagac
atcccctgcgatgttggagcacctcctgtcaagtttgatccacagttcctggcagggctc
aagccgactgagtttgggatgtacggtcgcaatactcggggtttgcgaagaaatcaggcc
gagaacactcgaaacgtgaacaaatcaggaagctctgggctcaaggccccgaaattcctc
agtgaaaaagcccgcgagcttgctactagtaatgccgctgcctctgataagaaggctgac
gagctgatcagctctcttactgatatgggacttgaaagcaagaagtctgacgttccagtc
atgtatagaactgttgagatcaaatacagcaaattcggggtggacgactttgacttcggt
ttctacaacaacacgcgatactctggactcgagactcatatctcgaattcatatgctaac
tcgcttttacaaatcatgcacttcactcctgtcattcgaaatcttgctcttcagcatgct
gctacctcttgcgtgagcgagatttgcctgctgtgcgagcttggattcttgtttgatatg
cttcaaaaggctgaaggctcgatatgccaagcaacgaacttactaaaaaccctgagtaat
caccctcaagccggtcctcttggtctactcgaggaagatcctcatggatcatctcttaac
gttatgcttcaaggactcactcgatttctcctggataaaatagtgcatgattataggact
atcaacccatcgtcgactgccatggaccaggtcttggccacttccgcaacgacctcaatc
agatgcataaactgtaggagcgaatatactcgacctggatcaacatatgtcaatgatctg
ctttatccatctcctgccggcagccgaaatgccaagttaccacgcatcagcttttctcaa
gttctcaaaaatagtgttgaaagggaaacgacgtccaaaggatggtgtagtcgatgccag
cggtaccagaccatagcgacgagaaagagcattcacagtataccggctgtactcatgcta
aacaccgccatcacaaaccaagatcaacgaatgctttggtcaacaccaggttggcttccc
gaggagattggaatcatcgtagaacaagggcagtttttctgttacgaaggcgaagacctg
aaacttcacctccagaggggcatccacaacatcgcagtgtattcgctgacaggcatggcc
attaatattgagagtggacaatcgcaaaagtcacaccttgtttcgatggtcaatgtggca
catgcagaaccagaggcgcctggagagagtcgatggcatcttttcaacgacttcttggtg
aggtcggttagcacggaagaggcactcgctttcaacacatcttggaaggtcccttctgta
attgcataccagataagagatgagaacaacaagatcgatactgaatggaggagcaacatc
gacacttccatactttaccaagacttcaatgcaaacgccgatccatcaacaaagacctat
caagtgctcaaccctgagactgaggcgcctggccccaataccattattgcactggacact
gagttcgttgctgtgcgacaacctgaaattgaaatgaattctgatggtgagcgggaaacc
atacggccgatagtgtacgcacttgctcgtgcatcagttgtccgcggtcagggggaaaac
gaagggacacccttcatcgatgattatatcaacataaaggaaccgattgtcgactatttg
acatcgtattcgggaatcactgaacaagacttggatcctagagtttcgaaacatagtctc
ctgtcgttgaagatggcatacaagaagatgtggattcttcttaacctcggatgcaagttc
cttggccacggactaaaacaagacttccgagttatcaacatacacattcctaaatcgcag
gtcatcgacacgattgacctgttcttcctccaaactcggttaaggaggctatcgctggct
tttctggcgtggtatctcttgaaggaagatatccaaatggagacccacgattcgatcgaa
gattcacggacagcactcaagttgtataagaagtatctcgagttccaggatgccggaatc
ttggagaccatattgcaagatatttaccgagctggccgagaggtcaacttcaagccgcct
cgcaaggacggccagcatatcccaaggacggacacccctccccctttgccagtcgatggc
tcaacagggccggtaacacctgtcagaagccacaacattctggcacagacacctggatct
gcattcggaggtggctctagctggacaccaggaaagggatcaccattaccatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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