KEGG   Gossypium arboreum (tree cotton): 108451893
Entry
108451893         CDS       T05776                                 
Name
(RefSeq) probable pectate lyase 5
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108451893
Enzymes [BR:gab01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     108451893
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD DUF5997
Other DBs
NCBI-GeneID: 108451893
NCBI-ProteinID: XP_017605088
Position
10:complement(57544955..57549141)
AA seq 500 aa
MLPFTCILVICILGPFSSFGRAAFSLSLPHQHPHPESVVHDVQRRLNVSISRRQALSVSQ
KDQCLTGNPIDDCWRCDPNWYNNRQRLADCSIGFGQGTLGGKGGRVYTVVDSSDNDVANP
KPGTLRHAVIQDEPLWIIFSTNMVIKLKHELIFNSFKTVDGRGVTVHVTGNGCITLQYVS
HVIIHNIHVHHCKPSGNADIASSPTHVGWRGRSDGDGISIFSSQKIWIDHCALSYCTDGL
IDAIMGSTGITISNNYFSHHNEVMLLGHDDRHLADSGMQVTIAFNHFGRALVQRMPRCRL
GYIHVVNNDFTAWEMYAIGGSANPTINSQGNRYTAPVDPNAKEVTKRVDTDEREWASWNW
RTEGDLMVNGAYFVPSGADVSPQYAKASSIQPKSAAFIQQLTFTAGVFGESSEETGSYTY
PGYTGDTVPSGTGTTTTGSSGPTDDGNFFGMIFGSGAAPSPTPPALTSMASTFLSLLIIL
ILYSITNQGALPPLLSLLLL
NT seq 1503 nt   +upstreamnt  +downstreamnt
atgcttcctttcacctgcattctcgtaatatgtattttaggtccattctcttcatttggt
agagctgccttcagtctcagcctccctcaccaacatcctcaccctgaatctgttgttcat
gatgttcaaaggagattaaatgtgtctatatcaagaagacaagctttatcggtaagccaa
aaagatcaatgcctaaccggaaaccccatcgatgattgctggcggtgcgatcccaactgg
tacaacaaccgccaacgcttagctgactgttctataggtttcgggcaaggaaccctcggc
ggaaaaggcggcagagtctacactgtcgtggattcctccgacaacgacgttgctaatccc
aaaccaggcactctccgccacgccgtcatacaagacgaacccctctggatcatcttctca
accaacatggtcatcaagctgaagcacgagctgattttcaactctttcaaaaccgtcgac
ggccgtggtgtcaccgttcatgtcaccgggaatgggtgtataacattgcagtatgtctcc
catgttattatacataacatccacgttcaccattgtaaaccatcggggaacgccgacatt
gcttcgtcgccgacgcatgttggatggagaggaagatcggatggtgatgggatctccatt
ttcagttcccagaaaatctggatcgatcattgcgcccttagttactgcactgacggtctt
attgatgctataatgggctccactggaattaccattagtaacaactatttttctcaccat
aatgaagtaatgcttttaggccatgatgataggcatttggctgattcagggatgcaggtg
acgatagcttttaatcactttgggagagcattggtgcaaagaatgccgagatgccggtta
gggtatatacatgttgtcaataatgatttcacggcttgggaaatgtatgccatcggcggt
agtgctaaccctaccatcaacagtcaagggaatcgttatactgcaccagtggaccctaat
gctaaagaggtgacaaagagagtggacacggatgagagggaatgggcatcttggaactgg
agaacagaaggggatttaatggtaaatggagcctattttgtgccttccggtgccgatgta
agtcctcagtacgctaaagcttccagcatccagcctaaatccgctgccttcattcagcag
ctcactttcactgccggcgttttcggcgagtctagcgaagagactgggagctatacctat
ccagggtacaccggcgacaccgtgcccagtggcaccggcaccaccactactggcagttca
ggacccaccgatgatggcaacttctttggaatgatatttgggagcggcgcagcaccatcg
ccaaccccaccagcattaacatcaatggcttcaacatttttgtctcttttaattatttta
attttgtattctattaccaaccaaggtgcgctaccaccattactatcattattattgtta
tag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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