KEGG   Gossypium arboreum (tree cotton): 108454453
Entry
108454453         CDS       T05776                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03420  Nucleotide excision repair
gab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108454453
  09124 Replication and repair
   03420 Nucleotide excision repair
    108454453
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:gab03051]
    108454453
   03400 DNA repair and recombination proteins [BR:gab03400]
    108454453
Proteasome [BR:gab03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    108454453
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      108454453
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD CUE TECR_N UBA_3 Rad60-SLD_2 Ubiquitin_2 Dsc3_N Ubiquitin_4
Other DBs
NCBI-GeneID: 108454453
NCBI-ProteinID: XP_017608409
UniProt: A0A0B0NQ88
Position
11:70757915..70763040
AA seq 373 aa
MKLTVKTLKGSHFEIRVQPNDTVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVSEDGFLVVMLSKSKSLGSAGTSSAQPASSAPSTTAPVSNPTPAPEIPAQAPDSKSG
TSASDAATANPNTDTYSQAASNLVAGSNLEQTIQQLMDMGGGSWDKETVTRALRAAYNNP
ERAVDYLYSGIPELAEVAVPVPHFPSSQTTESGAAPVAPVSGAPNSSPLNMFPQETLSGA
AAGGLGSLDFLRNNQQFQALRSMVQSNPQILQPMLLELGKQNPQLLRLIQEHHAEFLQLI
NEPLQGSEGDIFDQAEQEMPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELA
ANYLLENSGDFED
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaagctcaccgtcaaaactctaaagggcagccacttcgaaattagggttcagcccaac
gacactgttatggcggtgaagaaaaacatagaggatatacaagggaaagacaattaccca
tgtggacaacagcttttgattcataatgggaaggttttgaaagatgaaactacgttagct
gataacaaagtctctgaagatggttttcttgttgtcatgctcagcaagagcaaatctttg
ggttcggctgggacctcgtctgctcagcctgcttcatcagctccgtctacaactgcacct
gtttctaatcctacccctgccccagaaattcctgcacaagcaccggactcaaagagcggt
acatctgcttcagatgctgcaacagctaatccaaatactgatacctatagtcaagccgct
tcgaatttagttgctggaagtaatcttgagcagactatacaacaattgatggatatgggt
ggtggcagctgggacaaagaaacagtaacacgtgcacttcgagctgcttataacaacccc
gagcgagcagtggattatctatattcagggattcctgaattggcagaagtggctgttcca
gtgcctcattttccttcaagtcaaaccactgaatccggtgctgccccagttgctcctgtt
tcaggggctcctaattcatcacctttgaacatgtttcctcaggaaacactctccggtgcc
gctgctggtggacttggatccctggatttcctccgaaacaatcaacagttccaagcattg
cgttcaatggtgcaatcaaacccacaaattttacagcccatgcttctggagctgggaaag
caaaacccccagcttttaagattaattcaagaacatcatgccgagtttcttcagctaata
aatgaacctctccaaggttctgaaggggatatatttgatcaagctgaacaagaaatgcct
catgcaatcaatgtgaccccggcagaacaggaggctatcgaacggctcgaagcaatggga
ttcgatagagcactcgtcatcgaagcatttttggcttgtgatcggaacgaagaattggca
gcaaactacttactggaaaattctggggattttgaggattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (23)   

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