KEGG   Gossypium arboreum (tree cotton): 108454587
Entry
108454587         CDS       T05776                                 
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03010  Ribosome
gab04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108454587
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108454587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:gab03011]
    108454587
   04121 Ubiquitin system [BR:gab04121]
    108454587
Ribosome [BR:gab03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    108454587
  Archaea
    108454587
Ubiquitin system [BR:gab04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108454587
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 zf-C4pol TBK1_ULD Ubiquitin_5 Plexin_RBD Dsc3_N DUF2604 OTU1_UBXL
Other DBs
NCBI-GeneID: 108454587
NCBI-ProteinID: XP_017608582
UniProt: A0A0B0P7T3
Position
11:complement(92931304..92933015)
AA seq 128 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatatttgtgaaaaccctaactggcaagaccataactctcgaggtcgagagcagc
gataccattgacaacgtcaaagccaagatccaagacaaagaaggaatcccaccggaccaa
caacgtctcatattcgccggaaaacagctcgaagatggccgtaccttggctgactacaac
atccagaaagaatcaacacttcatcttgttctgaggttgagaggtggaattattgagcct
tctttgatggctttggctcgcaaatacaaccaagacaagatgatttgccgcaagtgttat
gctcgtctgcatccaagagccgtgaactgccgcaagaagaagtgtggtcacagcaatcag
ttgaggccgaaaaagaagatcaagtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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