KEGG   Gossypium arboreum (tree cotton): 108458413
Entry
108458413         CDS       T05776                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
  KO
K14553  U3 small nucleolar RNA-associated protein 18
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108458413
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gab03009]
    108458413
Ribosome biogenesis [BR:gab03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    108458413
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 108458413
NCBI-ProteinID: XP_017613291
Position
12:93370434..93372717
AA seq 558 aa
MSLISQNPVSRNKVKFKRDDEVVSINGDINDTENGLESDSEISKLKKRKKEKENQIEVEQ
EKEIKKLESFLFGSIYSPLEFGKQVEEKAHDVFAQDGSALFFLDSSTNDVELSEESDYEQ
KTCKERKAVWVDEEEERTVINIAKVNRLRKLRKEEDESVISGLEYVSRLRAQHAKLNPGT
EWAKLDSGLRNDHGYDDESSDEEKGVVAASGYGNGEVVDDILRTNEDLVVKSRVKLLPGL
LEYSRLVDANAEEPSNGPINSVQFHRNAQLLLAAGLDRRIRFFQIDGKRNTKIQSVFLED
CPIRKASFLPDGSQVIIAGRRKFFYCFDLVKAKVDKIGPLVGREEKSLEVFEISPDSSTI
AFLGNEGYILLVSSKTKELIGTLKMNGTVRSLAFADNGNQLLSSGGDGEVYHWDLRTTTC
IHKAVDEGCINGTSLCTSPNGRMFAAGSDSGIVNVYNRDEFLGGKRKPIKTVENLTTKVD
FMKFNSDAQILAICSTMKKNSLKLIHVPSFTVYSNWPPLNKNLQHPRCQDFSPGGGFMAV
GNAAGKVLLYKLHHYNHA
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgagtttgatatctcaaaacccagtgtctagaaacaaggtgaagtttaaaagggatgat
gaagtggtttcgattaatggagatatcaatgatactgagaatgggttggaatctgattct
gaaatctctaagttgaaaaagagaaagaaagaaaaagaaaatcagattgaggttgagcag
gagaaagaaattaaaaagcttgaaagttttctttttgggtcgatttattccccccttgaa
tttggcaaacaagtggaggaaaaagctcacgatgtttttgctcaagacggttctgctttg
ttcttcttggacagttccacgaacgatgtggaattgtccgaggaaagtgattatgaacag
aagacttgtaaggaaaggaaagctgtttgggtggatgaggaggaggaaagaaccgtgata
aacatagctaaggtcaataggttgaggaagttgaggaaagaagaggatgagagtgtgatt
tctggtttggaatatgtttcgagattgagggctcaacatgctaagctgaaccctgggaca
gaatgggccaagctagattcagggttaaggaacgatcatggttatgatgatgaatcatct
gatgaagaaaagggtgtagtggcagcttctggttatggaaacggtgaagttgttgatgat
attcttagaacaaatgaagatcttgtggtgaagagtagggttaaattgttgccagggctt
cttgagtattcgagactcgtggatgcaaatgctgaggaaccttccaatggcccaataaat
tcagttcagttccacaggaatgctcagttactacttgctgctggattggatcgaaggatc
aggtttttccagatcgatggtaaacggaataccaaaatacaaagtgtttttcttgaagat
tgtccgattcgtaaggcatctttcttgcctgatggttcccaggtcattatagcagggagg
aggaagttcttctactgttttgatttagtgaaagcaaaagtcgataaaataggaccactg
gttggtagggaggaaaaaagcttggaagtttttgagatttcccccgattctagcactatt
gcatttttgggaaatgaaggttatatcttgttggtttcatccaaaacaaaggagctgatt
ggaacacttaaaatgaacggaacagtccgctctctagcttttgctgataatgggaaccaa
ttattgagctctggaggggatggagaagtctaccattgggacttgagaactacaacatgc
atccataaggccgttgatgaaggctgcattaatggtacgtctctttgtacatcaccaaat
ggaagaatgtttgccgctggttctgatagcgggatagtaaacgtttacaatagggatgaa
tttttgggaggtaaaaggaaaccaatcaagacagtcgagaatctaaccaccaaagtcgat
tttatgaagtttaatagtgatgctcaaatactagctatctgttctaccatgaagaaaaac
agtttaaagctgatacatgtcccatcatttacagtctactctaattggcctccactgaat
aagaacttacagcatccccgctgtcaggatttcagccctggtggtggtttcatggctgtt
ggaaatgccgccggcaaagtgctactatacaagttgcatcactacaatcatgcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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