KEGG   Gossypium arboreum (tree cotton): 108458568
Entry
108458568         CDS       T05776                                 
Name
(RefSeq) uncharacterized protein LOC108458568
  KO
K12880  THO complex subunit 3
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03013  Nucleocytoplasmic transport
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108458568
  09122 Translation
   03013 Nucleocytoplasmic transport
    108458568
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108458568
   03041 Spliceosome [BR:gab03041]
    108458568
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108458568
Spliceosome [BR:gab03041]
 Complex C
  Other components
   EJC/TREX
    108458568
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108458568
SSDB
Motif
Pfam: WD40
Other DBs
NCBI-GeneID: 108458568
NCBI-ProteinID: XP_017613472
Position
12:complement(9007966..9011018)
AA seq 164 aa
MAKEVAVASTPPQSSAPPLGSTVIPSQKESAFGSLELHRHQACFQFRRSNRSSLAFEPHG
HEKAKDIELKGHTDSVDQLCWDPKHADLIATTSGDKIVRLWDARRQSNNWTMDSSGSAVG
RKESGTVPPLDKTGGDESCIIVNEAELHCHPHRQGKQKLKTTVF
NT seq 495 nt   +upstreamnt  +downstreamnt
atggctaaagaagtagcagtagcatcgacgccgcctcaatcatctgcgccaccattggga
tctaccgttataccatcacaaaaagaaagtgcattcggtagcctggaattgcaccgacac
caagcttgcttccagttccgtcgatcaaaccgctcgagtttggcatttgagcctcacggt
catgaaaaggctaaagatatcgaattgaaaggacacactgatagtgtggatcaactatgt
tgggaccctaaacatgctgatctcatagcaactacatctggtgataagattgttcgtcta
tgggatgctcgaagacaatccaataactggaccatggatagctcagggagtgctgttggt
aggaaagaaagtggaacagttccaccattagataaaacaggaggtgatgaaagttgtatc
attgtgaatgaagctgaacttcattgtcatcctcataggcaaggcaaacaaaaattgaaa
actacagtcttttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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