KEGG   Gossypium arboreum (tree cotton): 108459668
Entry
108459668         CDS       T05776                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108459668
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gab01009]
    108459668
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108459668
   03036 Chromosome and associated proteins [BR:gab03036]
    108459668
Protein phosphatases and associated proteins [BR:gab01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     108459668
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     108459668
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     108459668
SSDB
Motif
Pfam: WD40 ComGF
Other DBs
NCBI-GeneID: 108459668
NCBI-ProteinID: XP_017614560
Position
1:2950295..2956791
AA seq 523 aa
MKCFRFCYESESVAPVGGSQPLDWKFSQVFGERTAGEEIQEVDIISAIEFNRNGDHLATG
DRGGRVVLFERTDTQDHVGHRRDLEKMDYPINRHPEFRYKTEFQSHEPEFDYLKSLEIEE
KINKIRWCQSSNGALFLLSTNDKTIKLWKVQEKKVKKVCNMNVDSTKAMGNGPIVGSSIS
TSSKQYIANGGCTSNDFSFPTGGFPSLHLPVVVVVNPECLFVTSHETNLMARCRRIYTHA
HDYHINSISNNSDGETFISADDLRINLWNLEISSQSFNIVDVKPANMEDLTEVITSAEFH
PTHCNMLAYSSSKGSIRLIDMRQSALCDTHSKLFEGQEAPGSRSFFTEIIASISDIKFAK
DGRHILTRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGNGL
RVATGSYSNLFRVFGCSEGSTEATTLEASKNPMRRQGQATSRPSRSLGNLSGVVRRVNGA
DNSGVDANGNAFDFTSKLLHLAWHPTENSIACAASNSLYMYYA
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgaagtgtttccggttttgttatgaatctgagtccgtggctccggtgggaggatcgcaa
ccgcttgactggaagttctctcaggtgttcggagaacggacggccggagaggaaattcag
gaagttgatatcatatctgcaattgaattcaatagaaatggcgatcaccttgctaccggt
gatcgtgggggtcgggtggttttgtttgaaaggactgacactcaagaccatgttggacat
cgaagagatctagagaagatggattatccaatcaataggcatcctgagtttcgctataaa
acagagtttcagagccacgaacctgagtttgactatctgaagagcttggaaattgaggag
aaaattaacaaaattaggtggtgccagtcatctaatggtgctctttttcttttgtcgaca
aatgacaaaacaatcaagttatggaaggtacaagagaagaaagtcaaaaaagtatgtaac
atgaacgtggactcaaccaaagccatgggaaatggtcctattgttggttcaagtatatca
acaagctccaaacaatacattgcaaatggaggatgcacgagcaatgacttctcattccca
actgggggtttcccatctttgcatttgcctgtggtagttgttgtgaatccagaatgctta
tttgtaaccagtcatgagacaaaccttatggccagatgtcgaagaatatatactcatgct
cacgactatcatatcaattccatatccaataacagtgatggtgaaacttttatttcggca
gacgacctgcgaatcaatctttggaacctggaaattagcagccaaagttttaacattgtt
gatgtgaaacctgcaaacatggaggatttgactgaggtgataacttcagcagaatttcat
cctacacactgtaatatgttagcatatagtagttctaagggctcaattcgtcttattgat
atgcgacaatctgcattatgtgatactcacagcaaattgtttgagggacaagaagctcca
ggttccaggtctttcttcacagagatcatagcatcaatctccgacattaagtttgccaaa
gatggaaggcatatactaactcgtgactatatgacccttaagttgtgggacataaatatg
gattcaggtccggttgcaactttccaggttcatgaatatcttagacctaagctttgtgat
ctgtatgaaaatgattccatctttgacaaatttgaatgttgcctaagtggaaatggactt
cgagtggctactggttcctacagcaatctgtttcgggtgtttggttgttctgaaggtagt
acggaagcaacaacactggaagccagcaaaaaccccatgaggagacaaggtcaggcgaca
tcaaggccttcaagatctcttggtaatctctctggtgttgtccgacgagtgaatggagca
gataactcgggagttgatgcaaatggaaatgcttttgatttcacttcgaagctgctacac
ttagcatggcatccaaccgagaactctattgcctgtgctgcatccaacagtctttacatg
tattatgcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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