KEGG   Gossypium arboreum (tree cotton): 108460550
Entry
108460550         CDS       T05776                                 
Name
(RefSeq) glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
  KO
K14164  glycyl-tRNA synthetase [EC:6.1.1.14]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108460550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gab03016]
    108460550
Enzymes [BR:gab01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.14  glycine---tRNA ligase
     108460550
Transfer RNA biogenesis [BR:gab03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    108460550
SSDB
Motif
Pfam: tRNA_synt_2f tRNA-synt_2e DALR_1
Other DBs
NCBI-GeneID: 108460550
NCBI-ProteinID: XP_017615564
Position
12:complement(45775771..45790195)
AA seq 1072 aa
MAILAFPLVISFLKPNAPYFSLLRLAKPNAILTVPPPPLNRRYFRRTSATSAVHTSSVQQ
QSSTDASDKPKKASVLTFQQAIQRLQEYWASVGCAIMQCSNTEVGAGTMNPLTYLRVLGP
EPWNVAYAEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQDLFIRSLSALGIDISE
HDIRFVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLQLSPISVEITYGLERIL
MLLQGVDHFKKIQYADGITYGELFMENEKEMSAYYLEHASVDHIQKHFDFFEEEARSLLA
SGLPIPAYDQLLKTSHAFNILDSRGFVGVTERARYFGRMRSLARQCALLWLKTRESLGHP
LGVVSESVDHVCPKEVLEAAVKKVHHDPRLFVLEIGTEEMPPHDVVNASQQLKDLVLQLL
EKHRLNHGGIQAFGTPRRLVISVESLCPKQAENELEVRGPPALKAFDPQGNPTKAAEGFC
RRYAVPLDSLFRKADGKTEYVYACVKESARFALEVLSEELPGMLAKITFPKSMRWNSQVM
FSRPIRWIMSLHGDAVVPFTFAGILSGNLSYGLRNTATATVMVESAESYCSIMKNAGIGI
DIEDRKKTILERSHLLAKSVNGNIAFQESLFNEVVNLVEAPVPVLGKFKESFLELPDDLL
TMVMQKHQKYFPITDGNGKLLPYFIAVANGAINEMVVRKGNEAVLRARYEDAKFFYELDT
NKRFKDFRTQLKGILFHEKLGTILDKMTRVESMVCKLTMGFGVEEDMLLIIKEAASLAMS
DLATAVVTEFTSLSGIMARHYALRDGYSEQIAEALFEITLPRFSGDLLPKSDVGIILAIA
DRIDSLVGLFAAGCQPSSTSDPFGLRRISYGLVQILVEKDKNMNLKHALELAADVQPIKV
DATTIEDVYQFVTRRLEQYLVDKGISPEVVRSALAERANLPCLAAKTARKLEALSKGDLF
PKVVEAYSRPTRIVRGKEVDADIEVDATAFETNEERALWDTFLSVENKIHPGIEVDDFIE
VSSELVQPLEDFFNQVFVMVEDERIRKNRLCLLKKIADLPKGVVDLSVLPGF
NT seq 3219 nt   +upstreamnt  +downstreamnt
atggctatccttgctttccccttagtcatttcctttcttaagcccaacgctccttacttc
tctctcctccgtctcgccaagcccaatgccatcctcaccgtgcctccgcctcctttgaac
cgccgctacttccgccgaacatccgccacctccgcagttcacacttcttcagttcagcaa
cagtcctcgacagatgccagcgataagccgaagaaagcttctgttctgacatttcaacaa
gctattcaaagactccaggaatattgggcgtcggttggatgtgctataatgcaatgcagc
aacaccgaggttggagccgggaccatgaatcctttgacatacttgagagttcttggtcca
gaaccatggaatgttgcgtatgcggaacctagcatccgtccagatgatagtcgttatggg
gaaaatcctaataggctccaacgccacactcaatttcaggttatactaaagcctgatcct
ggaaattctcaagacctctttattcgtagcctttcagcgttaggtattgacattagtgag
catgatatacggtttgttgaggacaattgggagagcccggtactgggtgcatggggtttg
ggctgggagatctggatggatggtatggagatcactcagttcacctatttccagcaggct
ggaagtcttcaattgtcaccaatatctgttgaaatcacatatggccttgagcgtatactt
atgttacttcagggtgtcgatcattttaagaaaattcagtatgctgatgggatcacatat
ggtgaacttttcatggaaaatgagaaggagatgagtgcttattatttggaacatgccagt
gttgaccatattcaaaagcattttgatttttttgaggaagaagctcgttccttacttgct
tcaggattgccaattcctgcgtatgaccagcttctgaagacatctcatgcttttaatatc
ttggactctagaggctttgttggagtaacagagcgtgctcgttattttggtcgcatgcgc
agtttagcccgtcaatgtgctctactctggttaaagacacgagaatctcttggacatcct
ttgggtgttgtctctgaatctgttgaccatgtatgtcctaaagaggttctggaggcagca
gtcaaaaaggtgcaccatgatccaagattgtttgttcttgaaattgggactgaagagatg
ccacctcatgatgtagttaatgcaagccagcaacttaaagatttagtgttgcagctactt
gaaaaacatagattgaaccatggtggcattcaggcttttggcactcctcgcagactagtg
atatctgttgaaagtctttgtccaaagcaagcagagaatgagcttgaggttcggggacct
cccgctttgaaagcctttgaccctcagggaaatcctacaaaggctgctgagggtttttgc
cgcagatatgctgttccactagattctttgttcagaaaggcggatgggaagacagagtat
gtttatgcctgtgtaaaagaatccgctcgatttgctttggaggttttatctgaagaattg
cccggaatgcttgctaaaataactttcccaaagtcgatgcgctggaactcacaggtcatg
ttcagcagacctattcgttggattatgtccctccatggagatgcagtggttccatttaca
tttgctgggattttgagtggaaacttatcttatggtcttcgtaatactgcaacagctact
gtcatggtagaaagtgcagaatcttattgtagtataatgaagaatgctggaattggtatt
gatattgaggatagaaagaaaacaattttggagcgctcacatttattagcaaaaagtgtc
aacggaaatattgcttttcaggaaagcttattcaatgaggttgttaatcttgttgaagca
cctgttcctgtgcttggaaagtttaaagagtctttcttagagcttcccgatgatctttta
actatggttatgcagaagcaccaaaagtattttcccattactgatggtaatggaaagctg
ttgccctacttcattgcggtagcaaatggagcaatcaatgagatggtggtgagaaaagga
aatgaagctgttctcagagctcgatatgaagatgccaaatttttctatgagctggataca
aataaaagatttaaggatttccgtactcagctgaaggggattctttttcatgagaagtta
ggaacaattctggacaagatgacacgagttgaaagcatggtttgcaagctaaccatgggc
tttggagttgaagaagatatgcttctgattattaaggaggctgcatcacttgcaatgtca
gatcttgctactgctgttgtcacagaatttacttcactctctggcataatggcccgtcat
tatgctcttagagatggctattcagagcagattgctgaggccttgtttgagataacactt
cctaggttttctggagatttgctccccaaaagtgatgtgggaataattcttgcaatagct
gaccgaattgatagccttgttggcttatttgctgctggttgtcagcctagctctactagc
gatccatttggcctaagaagaatctcttatggcctagtccagatactggtggaaaaggat
aaaaatatgaatttgaaacatgctctggaacttgctgctgatgtccagcccattaaagtt
gatgcaaccacaatagaggatgtatatcagtttgttacacgaagactagagcaatatctg
gttgataagggaataagtccagaagtggttcgttccgcccttgcagagcgtgctaacttg
ccttgtctagctgctaaaacggcacggaaattggaagccttgtcgaaaggagatcttttc
cccaaggttgtagaagcttattctcgtccaactagaattgtccgtggaaaggaagtggat
gcggatattgaggtggatgctactgcatttgaaacaaatgaagagagagcattatgggac
actttcttgtctgttgagaacaaaattcaccctggtatcgaggttgatgacttcattgaa
gtatcctcagagctagtacaacctttggaagatttttttaatcaagtttttgtgatggtg
gaggatgaaagaattagaaagaacaggttgtgtttgcttaagaaaattgcagaccttcca
aaaggtgtggtagatctctcagttttgcctggattttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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