KEGG   Gossypium arboreum (tree cotton): 108460585
Entry
108460585         CDS       T05776                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like 5 isoform X1
  KO
K10730  ATP-dependent DNA helicase Q4 [EC:5.6.2.4]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gab03032]
    108460585
   03400 DNA repair and recombination proteins [BR:gab03400]
    108460585
Enzymes [BR:gab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     108460585
DNA replication proteins [BR:gab03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    108460585
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     108460585
SSDB
Motif
Pfam: DEAD Helicase_C ResIII RUN
Other DBs
NCBI-GeneID: 108460585
NCBI-ProteinID: XP_017615622
Position
2:complement(49171946..49183741)
AA seq 943 aa
MDYDSDSDGSHISATPPRDPLPRRPPQPPPKPPTSYKSTASTKRSSHLDIIFKLKKPSSS
KHDKIEPVPEPEPIQQPDLPSPVGNFPFQIRRPSDQPHPISIGRSLETLPAGFFSTRRAS
FSKICKPSLNFEPETSPEITAEPKINGSDGLGSTKTCNKKLPNLIRGDAPLPPVKLQKRS
EEGNFVRLNFNGYKRKFTAKGKKMNSYSYKSKYFKRSKRRVKSEVDTGSLCDEEGLVSEI
KLQSKAEKPSRCESVEAAISAVRSAVSDENLVRLLKAIYGYDLFRDGQLEAIKMILAGKS
TMLVLPTGAGKSLCYQIPAVVFPGITLVVSPLVALMIDQLKQLPPMIQGGLLSSSQGPEE
AAETLRMVQEGSIKVLFVSPERFLNADFLSIFSTPNSTPNFVSLVVVDEAHCVSEWSHNF
RPSYMRLGASLLRAKLNVECILAMTATATTTTLQSIMSALEISSTNLIQKAQVRDNLWLS
VSLSSNRMKDMLKLMKSSPFLEAQSIIVYCKFQSMYSSQAISNFYLHWILQSETDVISRY
LCDNNISAKSYHSGMLARDRSRIQELFCANKIRVVVATVAFGMGLDKRDVGAVIHYSLPE
SLEEYVQEIGRGGRDGRLSYCHLFFDDVTYYKLRSLMYSDGVDEFAVNKFLCQVFADDTS
SHSKVCSLVKELASRKFDMKEEVMLTLLTHLELGETQYLHLLPQLNVTCTLNFHKTSPML
LADKDTAVAAILKKSEIKQGQYVFNIPTVANSIGVAPGDLSNHLQNLKAKGEITYELKDP
AYCYKIVKVPSDFCSLTELLTRWLLDIENCKVWKLDAMYSSAVFAVDTCEKTHDCNVAQQ
TTYLQERISDYFRGDNNLDVLDKMGQNSPFLRADIKVFLQSNSNVKFTPRAIARIMHGIG
SPAYPSSIWSRTHFWGRYIQIDFKAVMNAAKAELMNFVGKDAP
NT seq 2832 nt   +upstreamnt  +downstreamnt
atggactacgattcagactccgacggatcacatatatcagccactcctccacgagaccca
ctcccgcggcggccaccgcaaccgcctccaaaacctcctacctcctacaaatctaccgca
agtaccaaacgctcctctcatttggatatcattttcaaactcaaaaagccatcttcgtcg
aaacacgataaaatcgaacccgtacctgaacctgaacccattcaacaaccggacctccct
tctccagtcggtaattttcccttccagattcgccgtccgtcggatcaaccccatccaatc
tccattggccgttcccttgaaaccctccccgccggtttcttctccacgcgtcgcgcctcc
ttctccaaaatttgtaaaccttccctcaatttcgaaccggaaacctcaccagaaataacc
gccgaacctaaaattaatggctctgacggcctgggttctaccaaaacttgtaacaagaag
cttcctaatttgatcagaggagatgcccctttacccccagttaaattacaaaagcgcagc
gaagaaggtaacttcgtgaggctcaatttcaatggctataaacgcaagttcacagccaaa
ggtaaaaagatgaatagttactcttacaaatcaaagtacttcaaaagaagcaagagaaga
gtcaaatccgaagtcgatacgggaagcctttgcgacgaagaaggtttagtgtcggaaatc
aagttgcagtcgaaagcagagaaaccgagtagatgcgagtcagttgaagcggcgatttcg
gcggttcgaagcgcggtgtcggatgagaacctggtgaggttgttgaaagctatttatggc
tacgatttattccgtgatggacagttggaagcgatcaagatgattcttgctggcaaatca
acgatgctagttttgccaacaggagctgggaagtctctttgctatcagattccggcagtg
gtttttccggggattacgttggtggtgagtccattggtggctttgatgattgatcaattg
aaacagttgccccctatgattcaaggcggtctcttgtctagcagtcagggacctgaagag
gctgctgagacactgaggatggtccaagaagggagcataaaagtgctctttgtttcacca
gaaaggtttttgaatgcagactttttgtcaatattttctactcctaactctactcctaac
tttgtatcacttgtagtggttgatgaagctcactgtgtatctgaatggtcgcataatttc
cggccctcatacatgcggcttggggcatctttacttcgtgccaaactcaatgttgaatgc
attcttgcaatgactgcaactgccacaaccacaactttgcagtctatcatgtcagctcta
gagatttcttcaacaaatctcattcaaaaggcacaagttagggataatctatggttatca
gtgtctttgagcagcaatagaatgaaggatatgctaaagttgatgaagtcctctcctttt
ttggaagctcaaagcattattgtttactgcaaatttcagtccatgtatagttctcaggcc
attagtaatttctacttgcactggattttgcagtctgaaactgatgtgataagcaggtac
ttatgtgataacaatatctctgcaaagagttaccatagtggtatgctggcaagggatcgt
agccgcatacaggagctattttgtgccaacaagattagagtggttgttgcaactgtggca
tttggcatggggcttgacaagagggatgttggcgctgtaattcattatagcttgccagaa
agcttagaagagtatgtccaggagattggtcgtggtggacgagatgggagattgtcctat
tgccatctattttttgatgatgtcacatattacaagctccgtagtcttatgtacagtgat
ggagtggatgaatttgcagtaaacaaattcctttgtcaagtttttgctgatgacacaagt
tcacatagcaaagtttgttccctggtcaaagaattagcatctcgcaaatttgatatgaaa
gaagaggtaatgctcacacttctaacacatctggagttgggtgaaactcaatacctgcat
ctgcttccacagctaaatgttacttgtactctgaatttccataagacttcccctatgtta
cttgctgacaaggatactgcagttgcggccattttgaagaagtcagaaattaagcaaggg
cagtatgtgttcaatataccaactgtggcaaatagcattggggttgcacctggtgatcta
tcaaatcacttgcagaatctaaaggcaaagggagaaataacatatgagttgaaggatcca
gcctactgctataagattgttaaggttcctagtgatttctgttctctcacggaacttctt
accagatggttactggatattgaaaattgcaaggtatggaaattggatgccatgtacagt
tctgcagtttttgcagtggatacatgtgagaagacacatgattgcaatgttgctcagcag
acaacatacttgcaagagagaatttcggattattttaggggggacaataaccttgacgtc
cttgataagatgggtcagaacagcccttttcttcgagcagatataaaggtctttctgcag
agcaactcaaatgtcaagtttactccaagagctattgcaaggataatgcatggaattgga
agcccagcgtatccttcttcaatttggtcaagaactcatttctggggaaggtatatacaa
atagatttcaaggcggtaatgaatgcagcaaaggcagaactcatgaattttgttgggaaa
gatgcaccttag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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