KEGG   Gossypium arboreum (tree cotton): 108463012
Entry
108463012         CDS       T05776                                 
Name
(RefSeq) replication protein A 32 kDa subunit A-like isoform X1
  KO
K10739  replication factor A2
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03030  DNA replication
gab03420  Nucleotide excision repair
gab03430  Mismatch repair
gab03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108463012
   03420 Nucleotide excision repair
    108463012
   03430 Mismatch repair
    108463012
   03440 Homologous recombination
    108463012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gab03032]
    108463012
   03400 DNA repair and recombination proteins [BR:gab03400]
    108463012
DNA replication proteins [BR:gab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    108463012
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     108463012
   MMR (mismatch excision repair)
     108463012
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     108463012
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon RMI2 tRNA_anti_2 TrmB
Other DBs
NCBI-GeneID: 108463012
NCBI-ProteinID: XP_017618435
UniProt: A0A0B0NHP4
Position
13:49159789..49162650
AA seq 281 aa
MFSSSQFEDSSPLAGGGFMSSQLGGSTPSSARIRDMQGLVPATVKQISEASQSGDEKSSF
IIDGVDVANVTVVGMVFNKNSRSSDVRFQLDDGTGRIECIRWVTERLDTRDLDALEDGTY
VRVNGHLQTFQSKRQLNAFSVRLVTNFDEVTCHYLECIHFHLQNSKVQSKADEGSVLASQ
APDLSFSTPVRGASNGHHPASTNDFSMQYNADGLKSFDKLVLNYLQQPSNIDREMGIHVD
ELSQQLKSPLEKIKDAIEFLEREGLVYSSIDDYHYKAVEGL
NT seq 846 nt   +upstreamnt  +downstreamnt
atgttttctagtagtcagtttgaagacagctcccccttggccggtggcggattcatgtct
tctcagctcggtggctcaactccatcttctgctaggatccgtgatatgcaggggttggta
ccagcgacggtgaagcagataagtgaagcatctcaatctggtgatgagaaatccagcttc
ataattgatggtgttgatgttgccaatgttactgtagttggcatggtgtttaacaaaaat
tcaaggtcctcagatgtacgtttccagctcgatgatggaacaggccgaattgaatgtata
agatgggtaactgaaagactcgacacaagagacttggatgccttggaagatgggacttat
gttcgtgttaatggacacttgcaaacttttcaaagcaagaggcaattaaatgccttctct
gtgaggttggtgacaaatttcgatgaagttacttgccactatcttgagtgcatacatttc
cacctgcagaattccaaagtacagtctaaagctgacgagggtagtgttttggcctcacag
gcgccagatttatcattcagcactcctgtgcggggtgcatcaaatgggcaccacccagct
tcgacaaatgatttctctatgcaatataatgctgatggactcaagagttttgataaattg
gtcctgaactatctgcagcaaccttcaaacattgatcgagaaatgggaatacacgtagac
gaactttcacaacagttgaaatctcccctagagaaaatcaaggatgcgattgagtttctt
gaaagggaaggtttggtttactcctccattgatgattatcactacaaggctgtagaaggt
ctctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system