KEGG   Gossypium arboreum (tree cotton): 108463843
Entry
108463843         CDS       T05776                                 
Name
(RefSeq) ubiquitin receptor RAD23c-like
  KO
K10839  UV excision repair protein RAD23
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03420  Nucleotide excision repair
gab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108463843
  09124 Replication and repair
   03420 Nucleotide excision repair
    108463843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:gab03051]
    108463843
   03400 DNA repair and recombination proteins [BR:gab03400]
    108463843
Proteasome [BR:gab03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    108463843
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      108463843
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_3 Rad60-SLD_2 TECR_N Ubiquitin_4 Dsc3_N
Other DBs
NCBI-GeneID: 108463843
NCBI-ProteinID: XP_017619280
Position
13:137381369..137386272
AA seq 384 aa
MKVSVKTLKGTHFDIEVKPEDAVADVKKNIETVQGADVYPAAQQILIYKGKVLKDDTTLA
ESSVTENSFIVIMLTKNKVASGEGSTASAAPAMKAPEASRPPTAPAPASTAPVAMSATAA
LTAESAPVASSTPLSDSDVYGQAASNLVAGSNLEGTIQQILDMGGGTWGRDTVVRALRAA
YNNPERAVEYLYSGIPEQAEAPPVARAPVVGQTTNPAAQPQQSAQTTAIPTSGPNANPLD
LFPQGLPNMGASGAGAGSLGFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPNLMRLI
QEHQGDFLRLINEPAEGGEGNILGQLAEAMPQAVQVTPEEREAIERLEAMGFDRATVLQV
FFACNKNEELAANYLLDHMHDFQD
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgaaggtttccgtcaaaactctcaaaggcactcacttcgatatcgaagtcaaaccagaa
gatgcggttgcggatgtaaagaagaacatagaaactgttcaaggggcagatgtttatcct
gctgcacaacaaattcttatctataagggaaaagttcttaaagatgacacgacactggct
gaaagcagtgtcactgaaaatagctttattgtgatcatgttgacaaagaataaggttgca
tctggggagggttcaactgcttcagctgctcctgcaatgaaagctcctgaggcaagtagg
ccaccaactgctccagctccagcttctactgcacctgttgcaatgtcagctacggctgca
cttactgctgaatctgctcctgttgcttcaagtactcctctgtcagattctgatgtttat
ggccaagcagcatctaatctggttgcagggagtaacttagagggaacaatccaacaaatt
cttgacatgggtggagggacctggggcagggacactgttgtccgtgccctgcgtgctgct
tataataacccagagagagctgttgaatatttgtattctggcatccctgagcaagctgaa
gctccacctgtggcccgtgctcctgtagttgggcaaaccactaaccctgcagcacaacct
caacagtctgcacaaacgacagctattcctacaagtggaccaaatgcaaatcccttagat
ctctttccccagggccttcccaacatgggtgcaagtggtgctggggctggctctcttggt
tttttacggaacagtccacagtttcaagctttgcgagcgatggtgcaagccaacccacaa
atattgcagcctatgcttcaagagttggggaaacaaaatcctaatttaatgagacttatt
caagagcatcagggtgactttcttcgcttgatcaatgaacctgctgaaggtggagaggga
aacattttggggcaattggctgaggcgatgccacaagctgtgcaagtcacacctgaggaa
cgtgaagccatagaacggcttgaagcaatggggtttgaccgtgcaactgtgctccaagtg
ttctttgcgtgcaacaagaatgaggaacttgcagccaactaccttttagatcatatgcat
gattttcaggattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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