KEGG   Gossypium arboreum (tree cotton): 108464110
Entry
108464110         CDS       T05776                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
  KO
K11851  ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gab01002]
    108464110
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108464110
   04121 Ubiquitin system [BR:gab04121]
    108464110
Enzymes [BR:gab01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     108464110
Peptidases and inhibitors [BR:gab01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   108464110
Membrane trafficking [BR:gab04131]
 Autophagy
  Mitophagy
   Other mitophagy associated  proteins
    108464110
Ubiquitin system [BR:gab04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    108464110
SSDB
Motif
Pfam: UCH UCH_1 DUF6548
Other DBs
NCBI-GeneID: 108464110
NCBI-ProteinID: XP_017619696
Position
13:56417752..56423963
AA seq 573 aa
MEQETSMRAIIRNWKHGYRALLHMRWAADFGFHISVVGLVGVVGFVLAIIRDGKLGEKRK
KYLEKLCLVPGLQNLGNNCFLNVILQALASCSYFQSFLQKILDECESTLVDRQGESLPLT
ITLSDLLEELGMAGERRVSLSPHKVMSALSLYIQNFDLTSQQDAAEAFLHLLSSLREEFS
DIYLPNQSTLADIFASQTSRILTPERKEVQNEQKRWQQHYLGPFDGIIGSILSCRSCSYQ
ISLDFQFFHSLPLFPVLYGASTIMAGCTLEDCLWQFVLAEKLENYYCSHCWHSAAIKFLS
CKGANEIEIEKLKRCSAEESCDCRSFCCLENLPWSNNFSNTLKQLCIARCPKILCLHLQR
ASINEFGELIKLQGHIAFPLILDLSPFMTTEVEITNWEGVHKGQLKLQNQKTMPHLNLIN
AQYESILNRISKPTGEKVSSEILVANGSQCTTSPGESLPEKSKLYPTDGCSKASNIDMHE
QHNDKISLTSKLPPSEIKLYRLASVVEHFGRPGGGHYTVYRSMRTKSDEQDSDEYSEPAT
TKWFCISDSQVCSVSEKDVLAAEASLLFYERIV
NT seq 1722 nt   +upstreamnt  +downstreamnt
atggaacaagaaactagtatgagggcaataatccgcaattggaaacatggttatagagct
ttgttgcatatgagatgggctgctgattttgggtttcatatatctgtggttggtttagtg
ggagttgttggttttgtattggctataataagagatggaaaattgggggaaaagagaaaa
aaatatttggagaagttatgcttagttcctgggttgcaaaatcttggcaataactgcttc
ttgaatgtaatattgcaggctctggctagctgctcatattttcagtcttttcttcagaag
atactagacgaatgtgaatcaacactagttgacagacagggtgaaagcctgccacttaca
attactttatctgatctcttagaagaattaggcatggctggagaaaggagagtctcatta
agcccacataaagttatgagtgcattgtcgctttatattcaaaattttgatttaacaagc
cagcaggatgcagctgaagcgtttctccatcttttgtcttcattaagagaagaattttct
gatatatatcttcccaatcaaagtactctagcagatatttttgcttcgcaaactagtagg
attctaactccagagaggaaggaggttcagaatgagcagaaaagatggcagcaacactat
cttggaccttttgatggtataattggtagcattttatcttgccgcagttgttcatatcag
atttctttggattttcaattttttcacagcttgcccctttttccagtgctttatggtgct
tccaccattatggctggatgtaccttggaggattgcttatggcagtttgtccttgctgaa
aaacttgagaattactactgcagccattgttggcacagtgctgcaataaagtttttatct
tgtaaaggagcaaatgagattgagattgaaaagttgaagagatgcagtgcagaagaatcc
tgtgattgtcggagtttttgctgtctagaaaatctaccctggtcaaataacttttctaat
actctaaagcagctatgtattgctcgttgtccaaagattctatgtcttcatctacaacgt
gcttcaattaacgagttcggggaactaatcaagcttcagggccatattgcttttccattg
attttagacctgtcgccattcatgactactgaggtggaaataacgaactgggaaggggtc
cataaagggcaactgaagctgcaaaatcagaagacaatgcctcatctcaaccttatcaat
gctcaatatgaaagcattctcaatcgcatcagtaaaccaacaggagaaaaggtctcttca
gaaatattagttgcaaatggctctcaatgtactacttcccccggagaatctttgcctgag
aagagtaagctgtacccaactgatggctgttcaaaggcctccaacatagacatgcatgag
caacataatgataagataagcttgaccagcaagttacctccttcagaaattaaattatac
cgacttgcttcagttgtggagcactttgggagacctggaggtgggcattacactgtttac
agaagtatgagaactaaatctgatgagcaagattctgatgaatactccgagcccgctaca
accaagtggttctgcatttcagattctcaagtatgtagtgtctcagagaaggatgtttta
gctgcagaagcaagcctacttttctatgagaggatcgtataa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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