KEGG   Gossypium arboreum (tree cotton): 108466905
Entry
108466905         CDS       T05776                                 
Name
(RefSeq) valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X1
  KO
K01873  valyl-tRNA synthetase [EC:6.1.1.9]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    108466905
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:gab01007]
    108466905
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gab03016]
    108466905
Enzymes [BR:gab01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.9  valine---tRNA ligase
     108466905
Amino acid related enzymes [BR:gab01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   108466905
Transfer RNA biogenesis [BR:gab03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    108466905
 Prokaryotic type
    108466905
SSDB
Motif
Pfam: tRNA-synt_1 Anticodon_1 tRNA-synt_1g Val_tRNA-synt_C tRNA-synt_1_2 tRNA-synt_1e DUF2046
Other DBs
NCBI-GeneID: 108466905
NCBI-ProteinID: XP_017622752
Position
2:67384794..67400967
AA seq 1027 aa
MSLHQIAVSHSFLLSSRSAYTLNPLLFSKRNRFRISLSHSRFTSIKHRSFAVAVSDNGIF
TSPELAKSFDFTSEERIYNWWLSQGYFRPKFDWESDPFVISMPPPNVTGSLHMGHAMFVT
LEDIMVRYHRMRGRPTLWLPGTDHAGIATQLVVERMLASEGIKRVELGRDEFEKRVWEWK
EKYGGTITNQIKRLGASCDWTRECFTLDEQLSRAVIEAFIRLHEKGLIYQGSYMVNWSPK
LQTAVSDLEVEYSEEPGTLYYIKYRVAGGSRSDFLTIATTRPETLFGDVAIAVHPQDDRY
SKYVGKMAIVPMTYGRHVPIISDKYVDKDFGTGVLKISPGHDHNDYVLARKLGLPILNVM
NKDGTLNEVAGLYCGLDRFEARKKLWSDLEETDLAVKKEPHSLRVPRSQRGGELIEPLVS
KQWFVTMQPLAEKALLAVEKGELTIIPERYGKIYNHWLTNIKDWCISRQLWWGHRIPVWY
IVGKDCEEEYIVARSAEEALRKARDKYGKDVEVYQDPDVLDTWFSSALWPFSTLGWPDEL
AEDFKRFYPTTMLETGHDILFFWVARMVMMGIEFTGTVPFSYVYLHGLIRDSQGRKMSKT
LGNVIDPLDTIKEYGTDALRFTLALGTAGQDLNLSTERLTANKAFTNKLWNAGKFVLQVL
PNRDNVSGWQNIEACKFNTEGYLLRLPLPECWVVSKLHMLIDAVTESYNKFFFGDVGREI
YDFFWGDFADWYIEASKARLYHSGDDSVALVAQTVLLYVFENILKLLHPFMPFVTEELWQ
ALPNRREALIISSWPQTSLPRSTDLVKRFENLQALTRAIRNARAEYSVEPAKRITASIVG
SEEVIQYISEEKEVLALLSKLDLDNIHFADSPPEDAKQSVHLIASEGLEAYLPLADMVDI
SAEVLRLTKRLSKMQTEYEGLKARLNSPKFIEKAPNDVVRGVQEKAAEAEEKINLTKNRL
AFLKSTLFCTFNLWRTLQFSVVRSILYPKLRTDNEPRTQLALSDKKVLISFKKHFFYQIL
LVWENGR
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgagtcttcaccaaatagctgtctctcattcttttcttttatcttctcgctctgcttat
actctcaatcctcttttgttctcaaaaagaaaccgttttcgcatttccctctctcactct
cgtttcacttcgataaaacataggagctttgctgtggctgtatcagacaacggcattttc
acttctccagagttggcaaagtcgtttgattttacttcggaagaacgaatatacaattgg
tggctgtctcaaggatatttcagaccaaaatttgactgggaaagtgatccttttgtcata
tcaatgccacctcctaatgttactggctctctgcacatgggacatgcaatgtttgtaact
cttgaggatatcatggttaggtaccatcgcatgaggggaagaccaacactttggcttcct
ggaactgatcatgctggtattgcaactcagttggttgtggaaagaatgttggcttctgaa
ggaataaaaagggtagaactgggcagagatgaatttgaaaaacgagtttgggagtggaaa
gagaagtatggtgggaccattactaatcagattaagagacttggggcttcttgtgactgg
actagagaatgtttcacccttgatgagcagctaagtcgagctgttatagaggcgtttatt
agacttcacgaaaaaggattaatttatcaagggtcttacatggttaactggtctccaaag
ttacagactgctgtttcagacttggaagtagaatactctgaagagcctggtaccctctac
tatattaaatatcgtgttgctggaggttcaagaagtgatttcttaacaatagcaacaaca
cggcctgaaactttgtttggtgatgtagctatagctgtgcatcctcaggatgaccgatat
tccaagtatgttgggaaaatggcaattgtccctatgacatatggtcgtcatgttcctatc
atctctgataagtatgttgataaagactttgggactggtgtactgaagataagccctgga
catgatcataatgattatgttctagctagaaagcttggccttcctattcttaatgttatg
aacaaggacgggacattaaatgaggttgctggactgtactgtggccttgatcgatttgag
gcacggaagaaattgtggtctgatcttgaggagactgacttagctgtgaaaaaggaaccc
cacagtttaagagtaccgagatctcagcgtggcggagagttaatagagccactagtaagc
aagcagtggtttgtaacaatgcagcccttagctgaaaaggctcttcttgcagttgaaaag
ggagaattgaccattattcctgaaagatatgggaagatttataatcattggctgacaaat
atcaaggattggtgcataagcagacagctgtggtggggacaccgcatacctgtttggtac
attgttggaaaagactgtgaagaggaatatatagttgctaggagtgctgaggaagctctt
aggaaggctcgtgataaatacggaaaagacgtagaagtttatcaggatccagatgttctc
gacacttggttctcaagtgcattatggcctttcagtactcttgggtggccagatgagttg
gcagaggattttaaaaggttttatccgacaacaatgcttgaaactggccatgatatattg
ttcttttgggttgcaagaatggtcatgatgggaatcgaattcacaggaactgttccattt
tcatatgtatatcttcatggtctaatccgtgattcacaagggcgtaaaatgtctaaaact
cttggcaatgttattgacccacttgatactatcaaggagtatggcactgatgcgttgcga
ttcactcttgctttgggaactgctggtcaggatcttaatttatctactgaaaggctaaca
gcgaacaaggccttcacaaacaaattatggaatgctggcaagtttgtgctgcaggttctg
cctaatcgggacaatgtttctggttggcagaatatagaggcttgtaagtttaacacggag
gggtatcttctaaggcttcctcttccagaatgttgggtggtctcaaaactgcatatgctt
attgatgctgtcactgagagttataacaaatttttctttggggacgttgggagagaaata
tatgatttcttttggggtgattttgccgactggtatattgaagccagtaaagctcgcctt
taccactctggagatgattcagttgctttagtagctcagacagttctactctacgttttc
gagaatatactgaaattattacatccattcatgccattcgtaaccgaggaactgtggcag
gcacttcccaatcggagagaagctcttataatatcttcctggccacaaacttctcttccc
aggagtactgatttggtaaaaagatttgaaaatttacaagctctgactcgagcaatccgt
aatgctagagctgagtattctgttgagccagcaaagcgcataactgcttctattgttggt
agtgaagaagtcattcagtatatatctgaagagaaggaggtgttggctctcttatccaag
ctagatttagacaatattcatttcgctgattctcctccagaggatgcaaaacaatcagtt
caccttattgcaagtgaaggactggaggcatatcttccccttgctgatatggttgatatt
tctgctgaagtgctacgccttaccaagcgcctatcaaagatgcaaacggagtatgaggga
cttaaagctcgcctcaactctcctaaattcatagagaaagctcccaatgatgttgtccgt
ggggttcaggaaaaagctgcagaagcagaagagaagattaatctgaccaaaaaccgattg
gctttcctgaaatcaactctgttctgcacattcaacctttggaggactttgcagttttct
gttgttagaagcatattatacccaaagctccgcactgataacgagcccagaacgcaactg
gctttgtcagataagaaggtattgatttcatttaagaagcatttcttttatcaaatatta
ttggtgtgggagaatggaagatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (33)   

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