KEGG   Gossypium arboreum (tree cotton): 108469577
Entry
108469577         CDS       T05776                                 
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-like isoform X1
  KO
K15687  E3 ubiquitin-protein ligase makorin [EC:2.3.2.27]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gab04121]
    108469577
Enzymes [BR:gab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108469577
Ubiquitin system [BR:gab04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108469577
SSDB
Motif
Pfam: zf-CCCH_4 zf_CCCH_4 zf-CCCH Torus zf-CCCH_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-CCCH_3 zf-RING_UBOX zf-rbx1 zf-C3HC4_2 zf-C3HC4_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 108469577
NCBI-ProteinID: XP_017625969
UniProt: A0A0B0MJJ8
Position
3:complement(52998486..53003777)
AA seq 404 aa
MPKTKRVLCKFFAHGACFKGENCEFSHDWKDPPNNICTYYQKGICSYGSQCRYEHVKASQ
TDLSASSSSTKPRQFGVSGSAPLGPSTSTYRGSVVLPATSGEFPGSNGGFLPPSTNQAWH
LESGQQDLLGDGDVLQPRSANLVERPICSFAAAGNCPRGDNCPHIHGDLCPTCGKHCLHP
FRAEEREEHIKMCEKKQKHLEALKYSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFC
ISCIRNWRSSSPSSGMDVNTALRACPICRKLSYFVIPSVIWYSTPEEKQEIIDSYKAKLR
SIDCKHFNFGNGNCPFGTSCFYKHTVKPGSYAWKYHRPPPRRSNVIDMDSIFDVFEHLIA
EDEMNIFDAEDLENDDISMEMALFLMQLDYDSSDSSSDEENFHY
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgcctaagactaagagggttctttgtaagttctttgctcatggagcatgcttcaaaggg
gagaattgtgagttttctcatgattggaaggatccaccaaataatatttgcacatactat
cagaaaggaatctgttcttatggtagtcaatgcagatatgaacatgtgaaggcatctcaa
acggatttatctgcttcgtcttcatcgacaaagcctcgtcaatttggggtctctggttct
gctcctttaggtccttcaacgagtacatatcgtggttccgttgtactcccagctacttct
ggcgagtttcctggttctaatggaggcttcctacctccctcaacgaatcaagcatggcat
ttggaatctgggcaacaagatcttttgggtgatggtgatgttttgcagcctaggagtgct
aatctagtcgaacgtcctatttgctcatttgctgcagctggtaattgcccccgtggagat
aattgtccccatattcatggagacttgtgtcccacctgtggaaaacattgtttacatcct
ttcagagctgaggaaagggaggagcatataaaaatgtgtgagaaaaagcaaaagcacctc
gaggcattgaaatatagtcaagaaatagaatgcagtgtgtgcctggatcgtgttctctcg
aagcccacagcagctgaacggaagtttgggttgctctcggaatgtgatcatccgttttgc
atatcctgtattagaaattggcgcagcagttccccgtcctctggaatggatgttaatact
gcattaagggcttgcccaatctgtcgcaagctatcgtactttgtcattccaagtgtcatt
tggtattcaactccagaagaaaagcaggaaatcatcgatagctacaaggcaaaactgagg
tcaatagattgcaagcacttcaacttcggaaatgggaactgcccttttggtactagttgt
ttctacaagcatacggtcaagccaggctcttatgcatggaaataccacaggccacctcct
cgcagatccaatgttatagatatggactcaatttttgatgtcttcgagcacttaattgca
gaagatgaaatgaatatttttgatgctgaagatttggaaaacgatgatatatctatggag
atggccttatttttaatgcagctagattatgattcaagtgactcctcaagtgatgaggag
aattttcactattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system