KEGG   Gossypium arboreum (tree cotton): 108469796
Entry
108469796         CDS       T05776                                 
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 22-like isoform X1
  KO
K11366  ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gab01002]
    108469796
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gab03021]
    108469796
   04121 Ubiquitin system [BR:gab04121]
    108469796
   03036 Chromosome and associated proteins [BR:gab03036]
    108469796
Enzymes [BR:gab01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     108469796
Peptidases and inhibitors [BR:gab01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   108469796
Transcription machinery [BR:gab03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     108469796
Ubiquitin system [BR:gab04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    108469796
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     108469796
    SLIK complex
     108469796
SSDB
Motif
Pfam: UCH UCH_1 zf-UBP
Other DBs
NCBI-GeneID: 108469796
NCBI-ProteinID: XP_017626333
Position
1:complement(49190302..49193276)
AA seq 555 aa
MCARNSIYTTPKPCKHLADYKLRHGFNTYYSIRNCLKTTPNGRTRVAKHTTKIPRCSFCD
RYQGRLYFCLMCSSLWCPTHILLHTQSEKGHEVAIDMDRSELYCCLCCDQVYDPDFDKVV
VCNQVKDLPGGSKSKTNGFEACGERSSKRKRLDSGIGLDLKKSKLLVSMRDRRAKSCYPL
GLRGLNNLGSTCFMNSVLQALLHAPPLRNYFLNDRHNSIQCRKRSGEKLCLLCDIDAISS
AMFSGDRTPYTPAHFLYSWWQHSSNLASYEEQDAHEFFISVLDGIHETESKIRNSGKDDG
DCQCIAHRAFSGLLRSDVTCISCGFTSTTYDPCVDISLNMDTSNLSSSNANKPIKPDEKT
GASTLSGCLNFFTRAERLGSDQKLHCQNCQELRDSSKQLSIRRLPLVLCLHIKRVEHSLV
RKISRKINQYMQFPFSLDMTPYLSSSIVRSKFGNRIFTFEYDNSNSSAAYEIFAVIAHSG
MLESGHYVTYLRLKNQWYKCDDAWISEVDEGIVRASQCYMLFYVQKLLYNEAIEDSSFVH
ISPRRDPFDSTAGCS
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgtgcgcaagaaactctatctacactacccccaaaccctgcaaacacctagctgattac
aagctcaggcatggcttcaatacttattattccatccgaaattgcctcaagaccacccct
aatggaagaactagagttgctaaacacaccactaaaatacccagatgtagtttctgtgat
agatatcaaggaagactttacttttgtttgatgtgctcttcactatggtgtccaacccac
attcttttacatacccaatctgagaaaggccatgaggtagctattgacatggacagatca
gagctttattgttgtttgtgttgtgatcaggtctacgatcctgattttgacaaagttgtt
gtgtgtaaccaagtcaaggacttgcctggaggtagtaaaagtaaaaccaatggttttgag
gcatgtggtgagagatcaagcaagagaaagagattagattctgggataggattagatttg
aagaaatcaaaactgttggtttcaatgagagatcggagagcaaaatcatgttatccattg
ggattgaggggattgaacaatctggggagtacttgttttatgaactctgtgttgcaggct
ttgcttcatgctcctcctttgaggaattactttctgaatgatcgacacaacagtattcaa
tgcaggaaaagatctggtgaaaagctctgcttgctttgtgacattgatgctatttcttca
gctatgttttccggtgatcgaaccccttatactcctgctcactttctttatagctggtgg
cagcattcatcgaatctagctagttatgaggagcaggatgctcatgagttcttcatttca
gttttagatgggattcatgagacggaaagcaaaatacgaaactccggcaaagatgatgga
gactgccaatgtattgctcatagggcattctctgggttgttgagatctgatgtgacatgt
atctcctgcggatttacttccacaacttacgatccttgtgttgatatttcactcaacatg
gacacgagtaatttgtcttcatccaatgctaacaaacccattaaacccgatgagaagaca
ggtgcgtctactctttcgggttgtctgaatttttttacaagagctgagaggttaggttct
gatcaaaaacttcattgtcaaaattgtcaagaactacgtgactcgtcaaagcaactgtct
attagaagactcccattggtgctgtgtttacatataaagagagtcgagcactctttagtc
agaaaaatatcgaggaaaatcaatcagtatatgcagttccctttctcattggacatgact
ccatatttgtcatcctccattgttagaagcaagttcggaaatagaatattcactttcgaa
tatgacaactccaatagttctgcagcatatgagatttttgctgtgattgctcattcgggg
atgctggagtcaggacattacgtgacttatctgcgactaaagaaccagtggtacaaatgc
gatgatgcttggatatctgaggttgatgaaggaatagtgagagcttcacagtgttatatg
ttgttctacgtacagaagctgctttacaatgaagcgatcgaggattcaagtttcgtgcat
atttccccgcgtagagatccatttgactctactgccggttgttcctag

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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