KEGG   Gossypium arboreum (tree cotton): 108470551
Entry
108470551         CDS       T05776                                 
Name
(RefSeq) protein transport protein SEC13 homolog B-like
  KO
K14004  protein transport protein SEC13
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03013  Nucleocytoplasmic transport
gab04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108470551
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108470551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108470551
   04131 Membrane trafficking [BR:gab04131]
    108470551
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108470551
Membrane trafficking [BR:gab04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    108470551
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108470551
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    108470551
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 IKI3 WD40_2
Other DBs
NCBI-GeneID: 108470551
NCBI-ProteinID: XP_017627390
UniProt: A0A0B0MTB3
Position
4:complement(56204338..56206500)
AA seq 301 aa
MPAQKIETGHEDALHDVAMDYYGKRLATASSDTTIKIIGITGSSSQQLAVLHGHKGPVWG
VAWAHPKFGSILASCSYDAQVIIWKENNQNEWLQAHVFNDHKSSVNSIAWAPHELGLCLA
CGSSDGDISVFTARDDGSWDTTRIEQAHPVGVTSVSWAPSTALGAFIGSGLLDPVQKLAS
GGCDNMVKVWRLYNGSWKMDYSPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGKVIIW
TCGKEGEQWKGAILKDFKTPVWRVSWSLTGNLLSVADANNNVTLWKETVDDEWQEVNAIE
P
NT seq 906 nt   +upstreamnt  +downstreamnt
atgcctgcacagaaaatcgagacaggtcatgaggatgcactccatgatgttgccatggat
tattatggaaaacgattggcgactgcttcatctgatactaccattaagatcattggcata
actggatctagttcacagcaacttgctgttctacatggccataaaggacctgtttggggg
gttgcttgggcacatcccaagtttggatcaatccttgcatcgtgttcttatgatgcccag
gtgataatctggaaggaaaataatcaaaacgagtggctgcaggcccatgtttttaatgat
cataagtcatctgtgaactccattgcatgggcaccccatgagcttggcctctgtttggcc
tgcgggtcttctgatggggatatatcagtctttaccgctagggatgatggtagttgggat
accaccaggatagagcaagctcaccctgttggagtaacctcagtctcgtgggcaccatca
accgcactcggtgctttcattggatctggtctactggatcctgttcagaagctggcctct
ggtggatgtgacaatatggtcaaagtatggaggctgtataatgggagttggaagatggac
tacagccctgccctccagatgcacactgattgggtgcgggatgttgcttgggcacccaac
ttggggctcccaaaatccaccattgcaagtgcttctcaggatgggaaagttattatatgg
acttgcggtaaagaaggggaacaatggaagggtgcgattttgaaggatttcaagacccca
gtttggagggtctcatggtcgctgactggaaacttattgtcggttgccgatgccaataac
aatgttacattgtggaaagaaacggttgatgatgagtggcaggaagtgaatgctattgag
ccatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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