KEGG   Gossypium arboreum (tree cotton): 108473202
Entry
108473202         CDS       T05776                                 
Name
(RefSeq) polygalacturonase
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Module
gab_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108473202
Enzymes [BR:gab01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     108473202
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 Beta_helix
Other DBs
NCBI-GeneID: 108473202
NCBI-ProteinID: XP_017630226
Position
4:107544680..107546271
AA seq 407 aa
MAPHLNIVPSMFVLLLLFISASKVQSDAFDVVAKFGAKADGKTDLSKPFLDAWKEACASV
TPSTVVIPKGTYLLSKVNLEGPCKAPIEINVQGTIQAPADPSAFKDPNWVRFYSVENFKM
FGGGIFDGQGSIAYEKNTCENREFRSKLPVNIRFDFVTNALIQDITSKDSKLFHINVFAC
KNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDCISIGDGTKNMVIKEITC
GPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWPGEHGGAVSEIHFEDITM
NNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSALPEAIKFICSGSSPCQNV
ELADIDIKHNGAEPATSQCLNVKPITSGKLNPIPCSGPVPKTPSATA
NT seq 1224 nt   +upstreamnt  +downstreamnt
atggcaccacaccttaatattgttccttccatgtttgtacttttattattattcatttca
gcctctaaagttcaatcagatgcttttgatgttgttgccaagtttggcgcaaaagctgac
gggaaaacggatttgagtaagccatttttggatgcttggaaagaagcatgtgcctctgta
actccatcaacagttgtgattcctaaagggacatatttattatcaaaagtaaacttagaa
ggtccatgcaaggctcctattgagattaatgttcagggcactatacaggctccggctgat
cctagtgctttcaaagaccctaattgggttagattctatagtgttgaaaacttcaaaatg
tttggcggaggaattttcgatggtcaaggaagcattgcttatgagaagaatacttgcgag
aatcgtgaatttcgttccaaacttcccgttaatataaggtttgactttgtgaccaatgca
ttgatacaagacataactagcaaagacagtaaactattccacattaatgtttttgcttgc
aaaaacattaccctcgaacgtttgaagatagaggcaccggacgagagcccaaacacagat
gggattcacatgggcaaatcagagggggtcaatattattgcctctgacattaaaactggt
gatgattgtatttctatcggagatggcactaaaaatatggtcataaaagaaataacttgt
ggaccaggacatggtataagtatcggtagtcttggaaagttccaaaatgaagagccagtt
gagggaatcaaaatctcaaactgcaccatcactaatacttcgaatggagctcgaatcaaa
acttggccaggcgaacatggtggggcagtatcagaaatacattttgaggatattaccatg
aataatgtctcttcccctatcctaattgatcaacaatattgcccatggaataaatgcaag
aaaaatgaagaatcgaaagttaaactaagcaacattagcttcaagaacatccgtggcaca
tctgcgcttccagaagctatcaagtttatttgcagcggttcttcgccatgtcaaaatgtg
gaacttgcagacattgatattaagcacaacggagctgaacccgcaacatcccaatgtttg
aatgtcaagcctataactagtggcaaattaaacccgattccatgttccggccctgtccca
aaaacccctagcgccaccgcttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

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