KEGG   Gossypium arboreum (tree cotton): 108473378
Entry
108473378         CDS       T05776                                 
Name
(RefSeq) DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial-like isoform X1
  KO
K10908  DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:gab03029]
    108473378
Enzymes [BR:gab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     108473378
Mitochondrial biogenesis [BR:gab03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial RNA polymerase
    108473378
SSDB
Motif
Pfam: RNA_pol RPOL_N
Other DBs
NCBI-GeneID: 108473378
NCBI-ProteinID: XP_017630387
Position
4:66424481..66437105
AA seq 1028 aa
MSIPETPLISSNLLYKFHYSNPFHNNKPTTLYQNPPRISRIMWRNIAKHAISRTRCSQWF
PRTYSFLGVTRDSVFLEKLKFGSFCSSLGFLDMGGRKIGEVLGNEDCMGKPNFGLLRNEI
GCRLRGLCPNGYASVAEVASSTDVEDDVSAVEEIKELLNEMKKEHRRENINRRKILQIQE
TGMGGNKYRMLKSRQVKIETEAWEQAANEYRELLKDMCEQKLAPNLPYMKSLFLGWFEPF
RDVIIKEQELYRSGKLRAGYAAYLDQLPADMAAVITMHKLMGLLMTGGEHGCARVVQAAC
LIGDAIEQEVRIRNFLENTRKKKVDKEDEDGGSESNAAIKEQERLRKKVTNLIKKQKLPA
VRQIVKGQDNTKPWGQDAKAKVGCHLIELLMRTAYIQPPADQLADTPPDIRPAFLHSFKT
VVKENKKTGRRYGVIECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLPSY
IMRTHGAKQQREAVKRTPTNQLEQVFEALDTLGYTKWRINKRVLNVVDRIWTSGGRLADM
VDRNDVPFPEKPDTEDEALLRKWKWKVRSVKKENRERHSQRCDIELKLAVARRMKDEEGF
YYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGRSGLNWLKIHLANLFAGGVD
KLSLEGRLAFTENHLDDIFDSADRPLEGKRWWLKAEDPFQCLAVCIDLTEALRSSSPETF
VSHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAGRVLDIMRIDAQK
DPTVFPDALLAKILVNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVITDERELF
VASCYAAKTTLTALGEMFQAARAIMSWLGECAKIIASENQPVSWTTPLGLPVVQPYRALG
RHLIKTSLQVLTLQRETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLTFAGVH
DSYWTHASDVDKMNKILREKFVELYEKPILENLLESFQQSFPALSFPPLPERGDFDLRDV
LDSPYFFN
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgtccatccccgaaaccccattaatttcttctaatcttttatacaaattccattactct
aatccctttcataataataaacccacgactctttaccaaaaccctccaaggatttccaga
attatgtggagaaacatagctaaacatgccatttcaagaacccgttgttctcaatggttt
cctagaacttatagctttctgggtgttactcgggattcagtttttctggagaaattgaag
tttgggtctttttgctccagcttagggtttcttgatatgggtggtagaaaaataggtgag
gttttaggtaatgaggactgtatggggaagccaaattttgggcttttgaggaatgagatt
gggtgcagacttagaggattgtgcccaaatggatatgctagtgtggcagaggtggcttcg
tcgactgatgttgaagatgacgtatctgctgttgaagaaattaaggagttgttgaatgaa
atgaagaaagaacataggagagagaatataaataggcgtaaaattcttcaaatacaggag
acaggaatggggggaaacaagtaccgaatgttgaaaagcaggcaagtgaagattgaaact
gaagcatgggaacaagctgcaaatgagtatagggaacttttgaaggatatgtgtgagcaa
aaattggcacccaatttgccatatatgaagtctttgtttcttggttggttcgagcctttt
cgtgatgttattattaaggaacaagagttgtataggtcagggaaacttagggccggttat
gcagcttacttggaccagttgccagctgatatggcggcagtcatcacaatgcataagttg
atggggctgctgatgactggaggggaacatggatgtgctcgggttgtgcaggctgcttgc
ctgataggtgatgccattgagcaggaggttagaatacgcaatttcttggagaatacaagg
aaaaaaaaggttgataaagaggatgaagatggaggaagtgaatccaatgcggcaattaag
gaacaagagaggttaaggaaaaaggtgaccaatttgataaagaaacaaaagctaccagca
gtgaggcagatagtgaagggacaggacaacacaaaaccctggggccaggatgctaaggct
aaggttggatgccatcttatcgagttattgatgcgaactgcttatatacagcctccagct
gatcagttagctgatacaccaccagatattcgtcctgcatttctgcattctttcaaaact
gtagtaaaagaaaacaagaaaactggcagaagatatggtgttattgaatgtgacccacta
gtccgcaaagggctcgagagaactgcaaggcacatggtgattccttatatgccaatgttg
gtgcccccagtcaaatggacaggttacgacagaggagcatacttgttcttaccttcctac
attatgcgcacacatggagccaaacaacaacgagaagctgtcaagagaacccctacgaac
cagctagaacaagtctttgaggctctggatacacttggatataccaaatggaggataaat
aagcgggtccttaatgttgtagatagaatatggactagtggaggccgtcttgctgatatg
gtggaccgcaatgatgttcccttcccagaaaagccagatactgaggatgaagcattgctt
aggaaatggaagtggaaagtccgatctgtgaaaaaggaaaacagagagaggcattcacag
cgttgtgatatagagcttaaacttgctgtggcacggagaatgaaagatgaagaaggtttc
tactacccacacaatctagattttcgaggacgtgcatatcccatgcacccatatttgaat
catcttggctcggatctttgtcggggtgttttggagtttgcagagggtcgccctcttgga
agatctggcttaaactggctgaaaatacatcttgcgaatttgtttgctggtggggtggac
aaactgtctcttgaaggtcgattggctttcactgagaatcatctggatgatatattcgac
tctgcagacagaccacttgaaggaaagcgctggtggttaaaagcagaagatccatttcag
tgcttagctgtgtgcattgatctcactgaagctttaagaagctcctctcctgagacattt
gtttcccatatgcctgtgcatcaggatggttcctgcaatggtttacaacactatgctgca
cttggaagagacaagttgggagcagctgcagtcaatctggttgcaggtgaaaaaccagca
gatgtttactcaggaatagctggcagagtgcttgatatcatgcggattgatgcacagaag
gatcctacagtttttccagatgcattgcttgcaaaaatattggttaaccaggtggatagg
aaactggtgaagcagacagtgatgacctcagtctatggtgtaacttatattggggcacga
gatcaaatcaagaggaggttgaaggaacgtggtgtaattactgatgaaagagaactcttt
gttgcttcttgttatgctgctaagacaacgttaactgccttaggtgagatgtttcaagct
gcaagagctataatgagctggcttggtgaatgtgcaaagattattgcatctgaaaatcag
ccagtgagctggacaactccacttggactgcctgttgtacaaccataccgagccttagga
aggcatcttataaaaacttcccttcaggttttaactctgcaacgcgaaactgaaaagatt
atggtcaaacgacagaggacagctttccctccaaattttgttcactccctggatggctct
catatgatgatgactgcaattgcctgtaaaaaagcaggcttaacctttgcaggagttcat
gattcatactggacacatgcaagtgatgtggataaaatgaacaagatactaagagaaaaa
tttgttgaactctacgaaaaaccaatattggagaatttgttggaaagctttcagcagtct
ttccctgcattgtcttttcctcctttacctgaaaggggagattttgatctaagagacgtg
ttagactcaccctatttcttcaactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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