KEGG   Gossypium arboreum (tree cotton): 108473706
Entry
108473706         CDS       T05776                                 
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gab03036]
    108473706
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     108473706
    REST complex
     108473706
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108473706
SSDB
Motif
Pfam: PAH Sin3a_C Sin3_corepress
Other DBs
NCBI-GeneID: 108473706
NCBI-ProteinID: XP_017630910
Position
4:56194877..56203427
AA seq 1368 aa
MKRVKDDLYSGSHFKRPFGSSRPESHGQNQMPSGGGGEGGGGGGGGMGGAGVGGGISQKL
TTNDALTYLKEVREMFQDQKEKYDMFLEVMKDFKAQRTDTAGVIARVKELFKGHNNLIYG
FNTFLPKGYEITLDEDEAPAKKTVQFEEAISFVNKIKKRFQNDERVYKSFLDILNMYRKE
HKDINEVYCEVASLFEDHPDLLEEFKRFLPDPSAAPLTQQVPYGQNSAQRYNERSSATAT
LRQIQMDKRRRDRIITSHADHGISVDHPELDDDKTMMKMQKEQRKRLEKENRDRRTRDLD
DSKHDNNRDCNLQRIHDKKRYGRKIEGFASYDDRDTFKSMCNQGFIFCERVKERLCSSDD
YQAFLKCLNIYSNGIIKRNDLQNLVTDLLGKHPDLMNEFNQFLERCENTDGLLAGVISKK
SLSGDGHASRPWKLEEKDREQKRELEGSKERERCREKYMAKSIQELDLSTCQRCTPSYRL
LPDDYPIPSASQRSELGAQVLNDYWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELD
MLLESVSSTAKRAEDLLNGINENKINVDSLVRIEDHFTVLNLRCIERLYGDHGLDVMEIL
RKNPALALPVILTRLKQKQEEWTKCRLDFNKVWAEIYLKNHYKSLDHRSFYFKQQDSKNL
STKSLVAEIKELKEKNQNEDDVLMASIAGHRQPLAPHLEYDYLDVGIHEDLYKLIEYSCE
EMCSTKELLDKVMMLWTTFLEPMLSVPPRPNGKEGTDDDGKAQNPTVNFTGSSIAECDGS
PRADANVNSEPQKGASDGDENSSPELPNSCRNGLTNGGTLAEEEPSGRVYRDDSKLEKEI
KCAADKRSGVNILAIEAENNQSRNNTEGASAASRPTSVAAGKGHESEVNVDLLHSSEGAR
VTKHALLVNGEPTDGFSASRYHEESTGPSKIEKEEGELSPSGDFQDYSIAYSDAGLKAVP
KAKHGIENRQYWSGTAKELHPGDAGGENDADADDEDSGNASEAGDNASGNESAGDECSRE
EHEEEEEMGRDEVDGKAESEGEAEGLTDAHVGGDGMSSFSEHFLFTVKPLAKHVPAVLSE
EDRNSSCVFYANDDFYVLFRLHRILYERVLSAKTNSTAAEIKCKSSKDASSSDFYARFTS
ALYHLLDGSADNAKFEDECRAIIGNQSYELFTLDKLIYKLVKQLQAVVTDEMDNKLLQLF
DYEKSRKHRKTTDSVYYENARVLLHEDNIYRLKSSSSPSRLSIQLMDNVIEKPEAFAVAM
EPYFSASLHNDFLSVYPGKNEPHGITLRRNKKKYASLDEFAATCMAMEGVELVNGLENKI
ACNSYKISYVLDTEDFFFRRRRKSPQCRSSYNNQARVQRFHKFLSASQ
NT seq 4107 nt   +upstreamnt  +downstreamnt
atgaagcgagtaaaagatgatttatattctggttcgcattttaaacgtccatttggttct
tcaaggcctgaatcccatgggcaaaaccaaatgccaagtggaggtgggggtgaaggtgga
ggagggggaggtggaggaatgggaggggcaggtgtaggaggaggtatatcacagaaactg
actaccaatgatgccttaacatatctaaaggaagtgagggagatgtttcaggatcaaaaa
gagaagtatgacatgttccttgaagtcatgaaggatttcaaggctcaaaggactgacaca
gccggtgtcattgcccgagttaaagaattattcaaagggcataacaacttgatttatgga
tttaataccttcctgccaaagggttatgaaataacccttgatgaagatgaggccccagca
aaaaagacagttcaatttgaagaagcgatcagttttgtaaataaaataaagaaacgtttt
caaaatgatgagcgtgtttataaatcattccttgatatcttgaatatgtaccggaaggag
cacaaggacataaatgaggtctattgtgaggttgcttctctttttgaggaccacccagat
ctgctcgaggagttcaaaagatttttaccagatccttcagcagcacctttgacgcaacaa
gttccgtatggtcaaaattcagctcagcgctataatgagagaagctctgctacagccacc
ttgcggcagatacaaatggacaagcgtcgaagggataggattattacctcccatgctgat
catggtatcagtgttgatcatcctgaactggacgatgacaaaactatgatgaaaatgcag
aaggagcagagaaagcgtttggaaaaggaaaatagggataggagaactcgtgatctggat
gattccaagcatgacaacaatagggattgtaatttgcagcgtattcatgataaaaaaaga
tatggaaggaagattgaaggatttgcctcttatgatgatagagatacttttaaaagcatg
tgcaaccaggggttcatattctgtgagagagttaaggagaggctatgcagctcagatgac
tatcaggcattcttaaagtgtcttaacatttacagcaatggaataatcaaaagaaatgat
ttgcaaaatttggtgaccgatttacttggcaagcatccagatcttatgaatgagttcaat
cagttcttggagcgttgtgagaatactgatgggcttcttgctggtgttatcagtaaaaaa
tcacttagtggtgatgggcatgcatccaggccatggaagttagaagaaaaagatagagag
caaaaacgtgaattggagggatctaaggaaagggagagatgcagggagaagtatatggca
aagtccatacaggagcttgacctatctacctgccaacgttgtaccccaagctatcggctt
ctacctgatgattatccaataccttcagctagtcagagatcagagcttggtgctcaagtg
ctgaatgattattgggtatctgtgacctctggaagcgaggattattcttttaagcacatg
cgcagaaatcagtatgaagagagtttgttcagatgtgaggatgatagatttgagctggat
atgttgttagaatctgtgagctcgactgccaagcgtgctgaggacttgctgaatggcatt
aatgaaaataaaatcaatgtggattctctggttcgcatagaagaccactttactgttctg
aatttaaggtgcattgagcgtttatacggtgaccatggtcttgatgtaatggaaatatta
cgtaaaaatcctgctcttgcgttacctgtcattttaactcgtctgaagcagaagcaagaa
gagtggacaaagtgccgtttagattttaacaaggtttgggctgaaatttatttgaaaaac
cattacaaatcacttgatcatcgcagcttctatttcaagcagcaggattcaaagaacctg
agtacaaaatctttagtggctgaaatcaaggagttgaaagagaagaaccagaatgaggat
gatgttctcatggcgagcattgctggtcacagacaacccctggctccacacctcgaatat
gactatttggatgttggcatccatgaagacctttataaacttatagagtattcatgtgaa
gagatgtgctcaaccaaagaactgttggataaagtcatgatgctctggaccacattcttg
gagccaatgttgagtgttcctcctcgacctaatggcaaagagggtactgatgatgatggt
aaagctcagaatcctactgtaaacttcactgggtcaagcattgctgaatgtgatggaagt
cctagagctgatgctaatgttaattctgagccacagaaaggtgctagtgacggagatgag
aacagttcaccagagctccctaattcttgcagaaatggtttgacaaatggtggaacttta
gccgaagaagaaccatctggtcgtgtctatagggatgactcaaagctggagaaagagatt
aaatgtgcagctgataaaaggtctggagttaacatacttgcaattgaagcagaaaataat
caaagcagaaacaacactgaaggggcttcagcagcttctagacctactagcgttgctgct
ggtaagggtcatgaatctgaagttaatgttgatcttctacattcatcagagggtgctcgt
gtaacaaagcatgctttattagtaaatggagagccaacagatggcttttctgctagtaga
tatcacgaagaatctactggtccatccaaaattgaaaaagaagaaggtgaattatcacca
agtggtgattttcaggattattctattgcgtacagtgatgctggtctaaaggctgtgcca
aaggccaagcatggtattgaaaacagacagtactggtctggaactgcgaaagagttgcat
cctggagatgctggaggagaaaatgatgcagatgctgatgatgaggatagtggaaatgcc
tctgaagctggtgacaatgcatcaggcaatgaatctgcaggtgatgaatgctctcgtgaa
gagcatgaagaagaggaagagatgggccgtgatgaagttgatggcaaagctgagagtgaa
ggtgaggctgaagggttgactgatgcacatgtgggaggagatggcatgtcgtcattttca
gagcattttctttttacggtgaagcctcttgcaaagcatgtacctgcagtcttatctgaa
gaagatcgaaacagttcttgtgttttctacgcaaatgatgatttctatgttcttttccga
cttcatcgaatcctgtatgaaagagtactgtcagcaaaaacaaattcaacagcggctgaa
ataaagtgtaaaagttcaaaagatgctagttcttcagatttttatgccagatttacgagt
gcactgtaccatctgcttgatggatctgctgacaatgcgaagtttgaggatgaatgtcga
gctataataggaaaccagtcatatgagttatttacattggacaagttaatatataaattg
gttaagcagcttcaagctgttgtgacagatgagatggataataaacttcttcaattgttt
gattatgaaaaatctcggaaacataggaagacaacggattcagtgtattatgagaatgca
cgtgtcctccttcatgaggataatatatatcggttgaaatcttcatcttcgccatctcgg
ttgtctattcagctgatggacaatgtcattgaaaagcctgaggcatttgctgttgcaatg
gaaccttatttttctgcttctttgcacaacgattttctgtcagtctatcctggaaaaaat
gagccacatggcattacgctaaggagaaacaagaaaaagtacgcaagtctagatgaattt
gctgctacttgcatggccatggaaggtgttgaactggttaatggtttagagaataagata
gcttgcaactcatacaagatctcttatgtgttggacaccgaagatttcttcttccgtagg
agaagaaagtcaccgcaatgcagatcttcatacaataatcaagcaagagtacaacggttc
cataaatttttatctgcttcgcagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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