KEGG   Gossypium arboreum (tree cotton): 108476100
Entry
108476100         CDS       T05776                                 
Name
(RefSeq) autophagy-related protein 2 isoform X1
  KO
K17906  autophagy-related protein 2
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:gab00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    108476100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108476100
   03029 Mitochondrial biogenesis [BR:gab03029]
    108476100
Membrane trafficking [BR:gab04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    108476100
Mitochondrial biogenesis [BR:gab03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    108476100
SSDB
Motif
Pfam: ATG2-VPS13_C Chorein_N ATG2_CAD PHD_4
Other DBs
NCBI-GeneID: 108476100
NCBI-ProteinID: XP_017633674
Position
5:54438148..54449159
AA seq 1991 aa
MFGAWNNFAKSAEAVVSRWAVKRVFKFLLKKKLGQFILGDIDLDQLDVQLTEGTIQLSDL
ALNVDYLNRKIGPAASLVIKEGSIGSLLVKMPWKGKGCQVEVDELELLLAPCSEDHLTSA
DQTCSSNDDGNDYNYTDLGKFSNEMAGSSRNPDNVHEGVKTIAKMVKWFLTSFNVKIKKL
IVAFDPSLEKGEKLGFHRTLVLRISEIECGTCVSEDSGLGDEGRDHSFLGISQLTNFVKF
HGAALELLQMEDVDNKSCASHTSGMTFSGLQSCSPSNAAIRILSGKGGGFSGNLKLSIPW
KNGSLDIRKVDADVSIDPVELRFQPSIIKWFLLSWETCKKFDKVENSMHYETADSIYLNS
NSQFQSPAHASAMAVIDEVVENHGRFSADCNSLRVQESVDEVLLPGSRFIPNWVPISIGK
NKRDCVGEEVDFGASVDQFFECFDGMRNSQSALGSSGMWNWTCSVFSAITAASSLASGSL
YIPSEQQHVQTNLKAAFAGISIVLSFHDEDLDHLCDLIDLNSNIHYLGIECRDISVRMQV
CPQEMRFEGTMVHVEAADYFFCKDGGDGSSNVDSKTFKIRNLQDEVHHALPLFSSSTGDQ
SSGVFCELVSTDFPLRGKGDMVKIMLFTTSGVTHCHCTVRSSSSGGGFSGKTSFLLKLPP
LTFWFNFSLLKMLSELLKEVGKSTEIGNNKKASYDACYENSESSHPRVKRSSSTCITTLP
SAETLRGNILISNARVILCFPFKSDDDDDGRYTSWDQFIVLDISSPSPSKGGMQDNSPHL
DGSLQKQFPSAGTRSLHLNFGNLCLYSVISAHKDGSGIDYGGMQRHKFSSQKILSVSNRS
GCLSFISIFWQEGPVTGLWIAEKAKFLATQEESRSGSKSIGKGYEFATVTTVKDLDDLSV
QTRQEIIFSTTCFAHIHLSSVMVDLDSSQYSGLHNLLKQIITGLSCFSCDATGTKEEDSM
PQTSVLLECDSVEISIKPDAVENVKAPMQSELPGSWGCLRLNIQKFDLLSVSNIGGITGS
SFLWLTHSEGTLWGSISGAQNQEFLLISCSDSAMKRGDGGGSNALSSRLAGSDIVNFWEP
ESCQDFTSITVRCSTIVAVGGRLDWMDVICSFFSLPSVDPEQSVEHNLPKGDLDTPPRRA
SFVLKLVDIAVSYEPHLKNLTVHSEVLDSNSAYSNGKEDMSESYVACLLAASTFCLSNSM
VADSLDNEYKIRVQDLGLLLREVFECDKLGDSYSAEQLNGDGYVKVAREALIEAVVKTNC
SNGLLWMVECSNSQIYVETCHDTTSGLIRLAAQFQQLFAPDVEESVLHLQTRWDNYQMAQ
QRTDEKSRDLNSDISPSSQIHTATVELEGKCGVAGLMDEISEDAFCLDGKETFQFSSSGV
EFHLPLEEHVTEEACSLSFENAEMFSRDLPVNGIGLESSQTSFLEPGCFPELIESYCLSE
LRPLTELSTGLKSSHEVLKNRSIDMGEGDLGRENGGWYEDAYLRIVENHISEPSGQAGLK
PIVEGQLSYHNSGVPDNTVNIIGRVLLKNINVRWRMHAGLDWHKTRKSNMCSNNILGKDR
TVCLELAVSGLEFQYDIFTPGGVSVSKLSLSVHEFHLYDKSTDAPWKLVLRYYDSKDHPR
ESSSKAFKLDLEAVRPDPSTPLEEYRLRIALLPIRLQLHQSQLDFLISFFGEKSTSLDQT
TSCHPDTDLLVKKSHNLAGHAIANEALLPYFQKFDIWPIIVRVDYSPHHVDLAALKGGKY
AELVNFVPWKGIELELKHVHAVGVYGWGSVCETIIGEWLEDISQNQIHKVLCGFPTVQSL
AAVGAAAAKLVSLPLESYRKDQRVLKGMQRGTMAFLRSISLEAVGLGVHLAAGTRDILLQ
AEYMFTNIPPPVSWSSQGKSKTKKKTNVRHNHPKDAQQGIQQAYESISNGLGKSASALVQ
TPLKKYQRGASASSALATAVRAVPTAAIAPASGCASAIHCALLGLRNSLDPERKKESMEK
YFGPTLPRDPN
NT seq 5976 nt   +upstreamnt  +downstreamnt
atgtttggcgcgtggaataattttgcgaaatcggctgaggcggtggtttcacggtgggcg
gtgaagagggtgtttaaatttttgttgaagaagaagcttgggcaatttattttaggggat
attgatttggaccaactcgatgttcagcttacagaaggcaccatccagctctctgacctc
gccctcaacgtcgattatcttaatcggaagattggtccagcagcatctttggtcataaaa
gaggggtctattggctctttattagttaaaatgccttggaagggtaaaggatgtcaagtt
gaggttgatgaacttgagctgttgcttgccccttgctcggaggatcatttaacaagtgca
gatcagacttgtagttccaatgatgatggtaatgattataattacaccgacttagggaaa
ttttcaaatgaaatggcaggaagttctaggaatcctgataatgtccatgaaggtgtaaag
acaattgcaaagatggtaaaatggtttcttacaagctttaatgtaaagattaaaaagtta
atagttgcatttgatccatctctagagaagggtgaaaaactgggcttccacaggactttg
gtgcttcggatatcagaaatagaatgtggaacttgtgtctctgaagattctggtttaggt
gatgaaggtagagatcacagttttcttggaattagccaacttacaaacttcgttaaattc
catggagctgcacttgagcttcttcagatggaggatgttgacaataaatcctgtgcttca
cacacatcaggaatgactttttctggattgcagtcctgttctccatcaaatgctgctatt
cgaatcctgtcagggaaaggaggtggattttcagggaatttgaagcttagcattccctgg
aagaatggttccttggacattcgcaaagtggatgcagatgtttccattgatccagtagaa
ttaagatttcaacctagcataattaaatggttcttactttcgtgggaaacttgcaagaag
tttgacaaggttgagaatagtatgcactatgagacagcagactctatatacttaaattcc
aattctcaattccaatcaccagcacatgcttctgccatggctgtcattgatgaagttgta
gaaaatcatggaaggttttctgcagactgtaattccttgcgtgttcaagaatctgttgat
gaagttttgctacctggttcgcgttttatacctaattgggtaccaatttccattggtaaa
aacaagagggactgtgttggagaagaagttgactttggtgcaagcgtggaccaatttttc
gagtgttttgatggaatgagaaattcacaatcagctttgggaagtagtggaatgtggaac
tggacgtgctctgttttcagtgcaataactgctgcatccagccttgcatctggatctttg
tatattccttctgaacagcagcacgttcaaactaatcttaaagcagcctttgctggaatt
tctattgtgttgtcctttcatgatgaagatctggatcatttgtgtgatctaatagatctc
aattcaaacattcattatttgggcatagaatgcagggatatctctgttcgcatgcaggta
tgtcctcaagaaatgaggttcgaaggaacaatggtgcatgttgaagctgctgattatttc
ttctgcaaggatggaggggatggtagcagtaatgttgacagtaaaacctttaaaatcaga
aatctgcaagatgaggttcaccatgctcttcctctgttttcctcgtctacgggagatcaa
tcatcaggtgtattctgcgagttagtttctactgattttccactcagaggcaagggtgat
atggtcaaaattatgttgtttacaacctctggggtgactcactgccattgtactgtgagg
tctagttcatctggtggtgggttttcagggaaaacttctttcttactgaaactgccacct
ctaactttttggtttaacttctccttgctaaaaatgttatcggagctcttgaaggaagtt
ggaaaatctacggaaataggtaataacaaaaaagcctcatatgatgcttgctatgagaat
tctgaatcatctcatcctcgtgtgaaaagaagttctagcacttgcattacaaccttgcct
tcagcagaaacgttacgaggcaacatattaatctccaatgcaagagtaattctctgtttc
ccttttaagagtgatgatgatgatgatggaagatacacttcatgggatcaatttattgtt
cttgatatttcttcaccatcaccatcaaagggtggaatgcaagacaatagtccacatctt
gatggaagtctgcagaaacaatttccctcagctggcacacgctctttgcatctgaacttt
ggtaatctttgcttatactcagtcatatctgctcataaagatggtagtggaattgactat
ggtggcatgcagaggcataaattttcttctcaaaagattctatctgtcagcaacaggagt
gggtgtctttccttcattagtatcttttggcaggagggtcctgtgactggcctttggata
gcagagaaagccaagttcttagcgacacaagaagaaagcaggagtggaagtaaatccata
ggaaaaggttatgaatttgccactgttaccactgtgaaagatcttgatgatctaagtgtt
caaacccgccaggagataatctttagcaccacatgctttgctcacattcatttgtcttct
gttatggttgacctcgacagttcacagtatagtggtttgcataaccttttaaaacagatt
attactggattatcgtgtttctcatgtgatgcaactggtaccaaagaagaggattcgatg
cctcaaacatcagttcttctggaatgcgattctgtagaaatttcaatcaaaccagatgca
gttgaaaatgtgaaagctcccatgcagagtgaacttccaggttcatggggttgtctgaga
ctgaacattcagaaattcgatttactatctgtctcaaatattggtggtattacgggttcc
agttttctatggttaacccacagtgagggtacattatggggttcaatctctggggctcaa
aatcaggagtttcttttaatctcatgtagtgattctgcaatgaaacgtggtgatggagga
ggttcaaatgctttatcttctaggttagctggttcagatattgtaaacttctgggagcca
gagagctgccaagattttacatctataactgtgaggtgcagcacaattgttgctgtaggt
ggtcgtttggactggatggatgtgatatgctcctttttcagcttgccttcggtggatcct
gaacaatctgttgagcataatttaccaaagggagatttagacactccccctcgcagagct
tcatttgttcttaaattggttgatattgccgtgagttatgaaccccacttaaagaacttg
actgttcatagtgaagttcttgattcaaattctgcttattcaaatggcaaagaagacatg
tctgaatcttatgtagcttgtctgctagctgcatctaccttctgtctttcaaattcaatg
gtggcagattccctagataatgaatataaaattagagtgcaagatctaggtcttcttctt
cgtgaagtctttgagtgtgacaaacttggggattcttatagtgccgaacaacttaatggg
gatggttatgttaaagttgctcgagaggcacttattgaagctgttgtaaaaactaactgt
agcaatggccttctgtggatggtagagtgttctaattctcaaatttatgttgaaacctgc
catgacaccacatctggtttgattcgcctggccgctcaattccaacagttatttgcccct
gatgtggaggagtctgttctgcacttacaaacacggtgggataattatcagatggcacaa
cagaggactgatgagaaaagtagagacctaaattcggacattagcccatcttctcaaatt
catactgctactgtagagttagagggtaaatgtggggtggctggcttgatggatgagata
tctgaagatgcattttgcttggatggaaaggagaccttccaattcagttcttctggggta
gagtttcaccttccccttgaggaacatgttactgaagaagcttgtagcttaagctttgaa
aatgctgagatgttttctcgcgatctacctgttaatgggataggtcttgaaagtagccaa
acttcctttctagaaccaggttgcttccctgaactaatagaaagttactgtctatctgag
ttacgcccccttacagaattatctacaggactaaaatcttctcatgaggtcctgaaaaac
agatccatagatatgggggagggagatcttggaagagagaacggtggatggtatgaagat
gcttatttaagaattgtagaaaatcacatttcagaaccaagtggtcaagctggtttgaaa
ccaattgtggaaggccagctttcatatcataactctggtgtacctgataatacagtaaac
atcataggacgtgtactccttaagaacattaatgtaagatggagaatgcatgctgggctg
gactggcacaaaactagaaagagtaacatgtgttccaataatattcttggaaaggataga
actgtatgtctagagcttgcagtatctgggttggaatttcaatatgacatattcacacct
ggtggagtatctgtgtccaaactttctctttcagtccatgagtttcatctctatgacaag
agcacagatgcaccttggaaactggtgctaagatactacgattcaaaagatcatcctagg
gaatcctcttcaaaggcattcaaactggacctagaggctgtaagaccagatccttctaca
cctcttgaggaataccggttacgcattgccctccttcctatccggttacagcttcatcaa
agccaacttgattttctcatcagcttttttggtgaaaaaagcacttcacttgatcagact
actagctgtcatccagatactgatttgttggtgaagaagagccataatcttgctggccat
gccattgcaaatgaggcattgctaccttattttcagaagtttgatatttggcccattatt
gttcgagttgactatagtcctcaccatgttgatctagctgcactgaaaggtggtaaatat
gcggaacttgtaaactttgttccatggaagggaattgagctagaacttaaacacgttcat
gctgttggtgtctatgggtggggcagtgtttgtgaaacaattatcggggagtggttggaa
gatatttctcaaaatcagattcataaagtattgtgtggctttcctaccgtccaatctttg
gctgctgttggtgctgctgctgcaaagctggtttccttgccacttgagagctatagaaaa
gatcagagggtactgaagggaatgcaaagaggtacaatggcattccttcgaagtatatca
cttgaagctgttggacttggtgtgcatttggcagcagggactcgtgacattctgcttcag
gctgagtatatgttcacaaatattcctcctcctgtatcatggtcttcacaaggcaagtca
aagacgaagaaaaagacaaatgttaggcataatcatcctaaagatgcccaacaaggaata
caacaggcttatgagagcatcagtaatgggcttgggaaatctgcttctgctttggttcag
acacctttgaaaaaataccaacgaggagccagtgcaagttctgctctggcaactgctgtt
agggcagttcctactgctgctatagcgccagcttccggttgtgcaagtgcaatacactgt
gctctccttggactcagaaatagccttgatcctgaacgcaagaaagagtcgatggagaaa
tattttggtcccactctgccacgggatccaaattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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