KEGG   Gossypium arboreum (tree cotton): 108479088
Entry
108479088         CDS       T05776                                 
Name
(RefSeq) putative pectate lyase 2
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108479088
Enzymes [BR:gab01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     108479088
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 108479088
NCBI-ProteinID: XP_017636995
Position
6:21448637..21449782
AA seq 350 aa
MNVIDKCWRGNPLWRSERQQLAKCSVGFAGKMINNIGKDVVKYKVTDPSDDPLSPKSGTL
RYGTTMIKGKVWITFKNSMTITLQRPLLLSSFTAIDGRGVDVHITGAGCLLVYQAIDIII
HGLRIHHCKAQPPSTVMGPNAKVIPLGQMDGDAIRLVTARKVWIDHNTLYECQDGLLDVT
RGSTDITVSNNWFRNQDKVMLLGHDDGHLRDKNMKVTVIFNHFGPNCNQRMPRVRHGYAH
VANNFYQGWEQYAIGGSMSPSIKSEANFFVAPNDAGNKEVTWRKGEKGLWKFYSVGDAFK
NGASFSKQTGVGGAKPNYDQEQYFKVEIAGSVKELTSESGVLRCSRSLTC
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaatgtaatcgataaatgttggagagggaaccctctttggcggagtgaacgacaacaa
ttggccaaatgctctgtcggttttgccggcaaaatgatcaacaacattggcaaagacgtc
gtgaagtacaaggttaccgatccttccgacgaccctttgagtcctaaatcagggaccctt
cgttacggaaccacaatgatcaaaggaaaagtatggatcacattcaaaaacagcatgacc
atcacactccaaagaccacttctcttaagtagcttcactgctatcgacggtcgtggcgtc
gacgtccacataacaggcgctgggtgcctgttggtgtaccaagcgattgatataatcatc
cacgggcttcgcatccaccattgcaaggcccaaccacctagcaccgtcatgggtccaaat
gcaaaggtgatccctttaggccaaatggacggagatgctataagattggtcaccgcaaga
aaagtgtggatcgatcataatacgttgtatgagtgccaagatggcctcttagatgtcact
cgcggttccaccgacatcaccgtctcaaacaactggttcaggaaccaagacaaagttatg
ctcctcggacatgatgatggtcatttgagagacaaaaacatgaaggttactgtcattttc
aaccatttcggacctaactgcaaccaaagaatgccaagagtccgccatggatatgcacac
gtagcaaacaatttctaccaagggtgggaacaatacgccatcggtggtagcatgagcccc
agcatcaagagtgaagcaaattttttcgtcgctccgaatgatgctggaaacaaagaggtc
acttggagaaaaggggagaaaggtttatggaaattttattcagttggggatgctttcaaa
aacggagcatcttttagtaagcaaacaggtgtaggtggggcaaaacctaattatgaccag
gaacaatattttaaggttgaaattgccgggtctgttaaagaattgacaagtgaatctggt
gttttacgatgctccaggagtttaacatgctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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