KEGG   Gossypium arboreum (tree cotton): 108483437
Entry
108483437         CDS       T05776                                 
Name
(RefSeq) transcription initiation factor IIF subunit beta-like
  KO
K03139  transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108483437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gab03021]
    108483437
Transcription machinery [BR:gab03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     108483437
SSDB
Motif
Pfam: TFIIF_beta TFIIF_beta_N Tau95
Other DBs
NCBI-GeneID: 108483437
NCBI-ProteinID: XP_017642320
UniProt: A0A0B0MH47
Position
7:124705624..124712904
AA seq 259 aa
MDEDHSNSGFLETGKADRSVWLMKCPVVVAKPWKSQTSSSSDSQPVAKVVLSLDPRKPDD
PSSMQFTMEMAGSEIGNMPKSYALNMFKDFVPMSVFSETTQGRVAMEGKVEHKFDMKPHE
QNLEEYGRLCRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLISSNTKEKKKTTPVKQ
PEMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGSNQ
GTYELKPEYKKSVDDTAAE
NT seq 780 nt   +upstreamnt  +downstreamnt
atggacgaagatcacagtaatagcggctttttggagactggaaaagctgatagatcggtt
tggttaatgaagtgtccggtcgttgtggccaaaccatggaagagtcagacctcttcttct
tccgattcacagcctgtcgccaaggttgtcctctctctcgaccctcgcaaacccgatgac
ccttcttctatgcagtttactatggagatggctggatctgagattggaaatatgccaaag
agttacgccttgaatatgtttaaagactttgttcctatgtccgttttctctgaaacaact
cagggtagggttgcaatggaaggaaaagttgagcataaatttgacatgaaaccacatgag
caaaaccttgaggagtatgggaggctctgtcgtgaaaggacaaataagtccatgataaag
aacagacaaatacaggttattgataatgaccgtggagtgcacatgaggccgatgcctgga
atggttggtctgatttcatccaacaccaaggaaaagaagaaaacaacgcctgttaaacaa
ccagaaatgaaaagaacaagaagggatcgtggggaattggaagatataatgttcaagctg
tttgagagacaaccaaattgggctttaaagcaacttgtccaagagacagatcagcctgct
caattccttaaagagatactgaatgagctctgcgtgtacaataagagaggcagtaaccaa
ggaacttacgaacttaagccagagtataaaaaatctgtggacgacacagcagctgaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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