KEGG   Glaciecola sp. 4H-3-7+YE-5: Glaag_0004
Entry
Glaag_0004        CDS       T01483                                 
Name
(GenBank) DNA gyrase, B subunit
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
gag  Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:gag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gag03032]
    Glaag_0004
   03400 DNA repair and recombination proteins [BR:gag03400]
    Glaag_0004
Enzymes [BR:gag01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Glaag_0004
DNA replication proteins [BR:gag03032]
 Prokaryotic type
  DNA Topoisomerases
   Glaag_0004
DNA repair and recombination proteins [BR:gag03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Glaag_0004
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 HIGH_NTase1_ass SMC_hinge Toprim_4
Other DBs
NCBI-ProteinID: AEE20973
Position
3748..6168
AA seq 806 aa
MAEENKYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCTN
INVKIHTDGSVSVKDDGRGIPTEIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GVSVVNALSRRLQILIRRAGKVHEQEYQHGVPQKPLEVIGESDTSGTSIRFWPSEETFTG
IEFHYDILAKRLRELSFLNSGVSIILEDERDGKRDHFMYEGGIQAFVEYLNQNKTPVHQQ
VFHFNSERDDGISVEVALQWNDSFQENVFCFTNNIPQRDGGSHLAGFRGALTRTLNAFME
KEGHNKKNKTSASGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVRPAVETVMGEKLN
EFLLENPSASKIIINKIIDAARAREAARKARDMTRRKGALDLAGLPGKLADCQEKDPSLS
ELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGI
GRDEYDPEKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGYIYIAQPPLYKTK
KGKQEQYLKDDDSLTKYLTAIALDNASIHVNEEAPGLSGPSLEKLVNQYQNAMKMIKRVS
RVMPEVILTSLVYSKVISLQDLQDEASLNVVAKSFTDSLTRNEVDGATYRYEVRVNSERN
NYYIALIIRLHGIDTEYKIDQEFIESIEYTRLRELNEAINGLIEEGGYVKRNDKVKPIFS
FAEGLDWLMAESKKGQYIQRYKGLGEMNPEQLWETTMDPGSRRMLQVKVEDAIAADQLFT
TLMGDHVEPRRAFIEDNALRVANLDV
NT seq 2421 nt   +upstreamnt  +downstreamnt
atggcagaagagaataagtacgattcgtcgagtattaaagtattaaaaggattagacgct
gtacgtaaacgtcctggaatgtacatcggagatactgacgatggtacaggcttacatcat
atggtatttgaagttgtagataactcaattgatgaagctcttgccggtcactgtactaac
attaatgtcaaaatccatacggacggctcagtgtctgttaaagatgatggccgtggaatt
cctaccgagattcatgaagaagaaggtgtatctgcagcagaagtcatcatgaccgttctt
catgctggcggtaaatttgatgacaattcatataaggtatcaggtggtttacacggtgta
ggtgtttcggttgtaaatgccttgtctcgtagattacaaatattgatacgcagagctggt
aaggtgcatgaacaagagtatcaacatggtgttccgcaaaagccactagaagtaatagga
gagtctgatacctcaggtactagcatccgcttttggccaagcgaagaaaccttcactggg
attgaatttcactacgatattctagcaaagcgtcttcgtgaactttcatttttgaattca
ggcgtaagtattattcttgaagacgagcgtgatggtaaacgtgatcactttatgtatgaa
ggtggtattcaagcattcgtagagtatttgaaccaaaataaaacacctgttcatcaacaa
gtttttcattttaatagcgaacgtgatgacggaatttcagttgaagtggcgttgcagtgg
aatgattcattccaagagaatgtattctgttttacgaataatattcctcagcgtgacggg
gggagtcatttagcaggtttccgtggtgctttaacgcgtactcttaatgcgtttatggag
aaagaaggccacaataaaaagaataaaaccagcgccagcggtgacgacgcgcgtgaaggt
ttaacagctgttgtatctgtaaaagtgcctgatcctaaattctcttctcaaaccaaagat
aaattagtctcttcagaagtacgtcctgcggttgaaaccgtaatgggcgaaaaactgaat
gagtttctattagaaaatccgtcagccagtaaaatcattattaataaaataattgatgca
gcacgtgctcgcgaggctgcgcgtaaagcgcgtgacatgacccgcagaaaaggcgcatta
gatcttgccggtctgccaggaaaactagccgattgccaagagaaagatccgtctctttct
gaactttatatagtggaaggggactctgctggcggttcagccaagcagggcagaaataga
aaaaaccaagcaattttaccgcttaaaggtaagattcttaacgttgaaaaagcgcgattc
gataaaatgttgtcttcgcaagaagtcgcaacactgatcaccgctttaggctgtggtatc
ggacgtgatgaatacgaccctgaaaaactgcgctatcaccgtattattatcatgaccgat
gcggacgtcgacggttcgcacattcgtacgctcttactgacctttttctaccgtcaaatg
ccagagattattgagcgcggctatatctatatcgctcagcctcccttgtataaaaccaag
aaaggcaaacaagagcaatatctgaaagacgacgactctttaactaaatatctaacagcc
atcgcgttagataatgcgtcaattcatgtgaatgaagaagcccctgggcttagtggaccg
tcgctagagaagttggttaatcaataccaaaacgccatgaaaatgattaagcgtgtcagt
cgtgttatgcctgaagtcattttaaccagccttgtttacagtaaagttatttcattacaa
gacctacaggacgaagccagcttaaatgtcgttgctaaaagcttcactgatagtcttaca
agaaatgaagttgatggtgctacttacagatacgaagttagagttaatagcgaacgcaat
aattactacatcgcgcttattatccgtttacatggtatcgatactgaatacaaaatcgat
caggagtttattgaatcaatcgaatacacccgcttgcgtgaattaaacgaagctattaac
ggtctgattgaagagggtggttacgttaaacgtaacgataaggttaagccgatattctcg
tttgctgaaggtttagattggttgatggctgaatctaagaaaggtcaatacattcaacgc
tacaaaggattgggtgaaatgaacccagagcaactatgggaaacaacaatggaccctggc
tcacgtcgtatgctacaggttaaagtagaagacgcgattgcagcagaccaattgtttaca
acgcttatgggagatcacgtagagcctaggcgtgcatttattgaagataatgcattaaga
gttgctaacctagacgtttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (40)   

Download RDF
DBGET integrated database retrieval system