KEGG T01483: Glaag

Glaciecola sp. 4H-3-7+YE-5: Glaag_0659

Entry

Glaag_0659        CDS       T01483

Name

(GenBank) DEAD/DEAH box helicase domain protein

K05591

ATP-dependent RNA helicase DbpA [EC:5.6.2.6]

Organism

gag Glaciecola sp. 4H-3-7+YE-5

Brite

KEGG Orthology (KO) [BR:gag00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gag03009]
    Glaag_0659
Enzymes [BR:gag01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     Glaag_0659
Ribosome biogenesis [BR:gag03009]
Prokaryotic type
  rRNA helicases
   Glaag_0659

SSDB

Motif

Pfam:

DEAD Helicase_C DbpA ResIII ERCC3_RAD25_C PRAI AAA_19 AAA_22 P-loop_SecA

Other DBs

NCBI-ProteinID:

AEE21622

Position

744328..745707

AA seq 459 aa
MSKEFSSLGLEPALLDNLQSMGFSQMTDIQADTLPAILSGRDVVAKAKTGSGKTAAFGLA
LLHNLDVKRFRVQALVMCPTRELAEQVALEIRRLGRAIHNIKVLTLCGGTPMGPQIGSLE
HGAHIIVGTPGRIMDHLYKRRLDLSEVNTLVLDEADRMLDMGFEDEMDAVIKSVPAQRQT
LLFSATYPESIAAISGQVQKDPLEVTVESTHDTDSIQQVFFEVDDAHRTKATAALLSHYQ
PESAIVFCNTKIACQEVADSLQSLGVSVLALHGDLEQRERNQVLVRFANKSVSVLVATDV
ASRGLDIKEVNAVISYHITPDPEVHIHRIGRTGRAESKGVALTLVAPDEVARANAIEDYQ
KAKLKWTGIQAMRFHVNRLVQPQYATLCVDGGKKAKLRPGDLLGALTKQAEIPGDDIGKI
HITEFHAYVAVKTRSVKRAMRQLGEGKIKGKKFKVRKFN

NT seq 1380 nt +upstreamnt +downstreamnt
gtgagtaaggaattttcttccctggggcttgagccagccttgctagataatttgcaaagt
atgggtttcagtcaaatgactgatattcaagctgatacattgcctgccatattgtctggg
cgagacgtagtagcgaaagcgaaaaccggtagtggtaaaactgcggcatttggattggcg
ctgttacacaatttagatgtaaagcgttttcgcgttcaggccctcgtgatgtgcccaaca
agagaattggccgagcaagttgctctagagatccgtcgtttagggcgggctattcacaac
attaaagttttgaccttatgtggtggcacacccatgggcccacaaattggctcgctagaa
catggtgcccacatcatagtgggaacgcctggtcgaataatggatcatctttataaacgc
cgattggacctatctgaagtcaatactttggtgctggatgaagcggatcgcatgctcgat
atggggttcgaagatgaaatggatgccgttattaaaagcgtgcctgcacagcgtcaaacg
ttacttttttctgctacttatccggaatcgatagcagcgataagtggtcaagtgcaaaaa
gatcccttagaagtgactgtcgagtcaacccatgacacagattcgattcaacaagtattt
tttgaagtagacgatgcgcatcgaaccaaggcaacagctgctcttttaagtcattatcag
cctgaatccgcgattgttttttgcaatactaaaatcgcgtgtcaggaagtggctgatagt
ttgcaatcactaggtgtgtcagtgctggctttgcatggtgacttagagcagcgtgagcgt
aaccaggtgttggtgcgctttgccaataaaagtgtatcggtattggtggccaccgatgtt
gcttctcgcggactagatataaaagaagtcaatgcggtgatcagttatcacatcacgcct
gaccctgaggtgcacatccatcgaattggtagaactggacgagcggaatctaaaggggtt
gcactgacgctggtagcgcctgatgaagtggctagagccaatgcaatcgaagactatcaa
aaagctaaattgaagtggactggcattcaggccatgcgttttcatgtgaatcgtcttgtt
caacctcagtatgcgaccttatgtgttgatggtgggaaaaaagcgaaattgcgacctggc
gacctccttggggcattgactaagcaagcagaaatcccgggtgatgatatagggaaaata
catattactgagtttcatgcttatgtagcggtcaaaacgcgcagcgtgaagcgcgccatg
cgtcagttaggcgaagggaaaattaaaggtaagaagttcaaagtacgtaaatttaactag

All links

Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (30)   

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