KEGG   Glaciecola sp. 4H-3-7+YE-5: Glaag_1090
Entry
Glaag_1090        CDS       T01483                                 
Name
(GenBank) DNA mismatch repair protein MutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
gag  Glaciecola sp. 4H-3-7+YE-5
Pathway
gag03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Glaag_1090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gag03400]
    Glaag_1090
DNA repair and recombination proteins [BR:gag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     Glaag_1090
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_II MutS_IV
Other DBs
NCBI-ProteinID: AEE22051
Position
complement(1284559..1287222)
AA seq 887 aa
MPKTNTSASTTSSSLQQHTPMMQQYLKIKAEHPDILLFYRMGDFYELFFDDAKKASELLD
ISLTARGKSGGNAIPMAGVPYHAVENYLARLVKMGQSVAIVEQVGDPATSKGPVERKVQR
IVTPGTVSDEALLNDKQDNILAAVFCPVQKSNQALVFGYATLDVTSGRFTLCELSGEEAL
AAELQRTNPVELLYPDDFAFSHLIDQRKGLRRRPQWEFDLQTATSQLTSQFGTNELSGFG
VQNHQIGICAAGCVMQYIKDTQRSALPHIDRIVLEAHNDTVVMDAATRRNLELTLNLSGG
TENTLASILDKTSTPMGSRLLQRWIHRPLTDVTVLKMRQRNIQGLIESPYPQLQDTLKKM
GDMQRVLARLALRSARPRDFARLRQAFALLPDIQHYLEHEVSHLDNDSQQCGLSQLAQQI
FQYPDFADLLERAVIDTPPVLIRDGGVIKEGYNEELDHLRALSKGATDYLEELEQREKER
TGIASLKVGYNRVHGYFIEVSRSQSDLVPVEYVRRQTLKNNERYIIPELKEHEDNVLSSQ
SRSLALEKKLYDELFDILLPQLTQLMQSADALAELDVLANLAERAESLDYHCPDLCPQSG
IHFSQGRHPVVEQVSDAPFIANPIEVNPNRRMLVITGPNMGGKSTYMRQTALIVLMAYIG
SYIPAQDAKIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILNNATANSLVLMDEIGR
GTSTYDGLSLAWACAEYLATKLQSFTLFATHYFELTGLAEALPELANVHLDAVEHGDTIR
FMHAVQDGAANKSYGLQVAQLAGVPKQVVQAAKRKLHELETGASVKTSVARPEAQPQAIK
AEEKVETQLDLLGQPSEAEELLYSIQPDDLTPKQALEYLYQLKKLAR
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgccaaaaacgaacacatcagcatcaacaacctcttcatctttgcaacagcatactccc
atgatgcagcaatatttgaaaattaaagctgagcatcctgatatcctgttattttatcgt
atgggtgatttttacgaactcttttttgacgatgctaaaaaggcctctgaactactggat
atttccctcacggcacgaggaaaatctggcggtaacgctattcctatggcgggcgtgccc
tatcatgcggtggaaaactatctagcgcgcttggtgaagatgggtcaatcggtggccatc
gttgaacaagtaggcgatccggctactagtaaaggccctgtcgagcgtaaggtacaacgt
atcgtcacaccgggcacggtatcagacgaagcactgcttaatgacaaacaagacaacatc
ttagccgccgttttttgccctgtacaaaaaagcaaccaagcattggtatttggctacgca
accttagatgtgaccagcggacgcttcactttgtgtgaacttagcggagaagaagctcta
gcagctgagcttcaacgtacgaatccagttgagcttttatacccagacgactttgctttc
agtcatttaattgatcagcgcaaagggctacgtcgccgccctcagtgggaatttgactta
caaaccgctaccagccagcttaccagccaattcggtactaacgaattatcgggtttcggc
gtgcagaatcatcaaatcggtatatgcgccgcgggctgcgtaatgcaatatattaaagat
actcagcgctctgcattacctcatattgaccgaattgtgctcgaagctcacaacgacaca
gtcgtgatggatgcagccactaggcgcaaccttgaacttacactaaacctatctggcggc
actgaaaatacgctggcaagtatactggataaaacctcgacacctatgggcagccgttta
ttgcaacgctggatccacaggccactaactgacgtaaccgtgctaaaaatgcgccaacgt
aatatccaaggtttaatagagtctccctatccccaattacaagacaccctgaaaaaaatg
ggtgacatgcagcgtgtactggcgcgcttagctttgcgcagtgctcgcccccgtgacttc
gcgcgtttgcgccaagcattcgcgctattgcctgatatccaacactacctagagcatgaa
gttagtcatcttgataatgactcgcagcaatgtggcttatctcaattagcacaacaaatc
ttccaataccccgacttcgccgatctattagagcgtgcggtcattgacacgccaccggta
ttgatccgagatggtggcgtcattaaagaaggctacaacgaagagctggatcatctgcgt
gccctgtcaaaaggggctactgattatttagaagaattagaacagcgggaaaaagagcgc
accggcatcgccagcctgaaagtcggttacaaccgcgtgcatggctactttattgaagtc
agtcgcagtcaatcggatttagtgcccgttgagtatgttcgtcgccaaacactcaaaaat
aatgaacgctatattattccggagctaaaagagcacgaagacaatgtgcttagcagccaa
agccgctcattagcgcttgagaaaaaactatacgatgagcttttcgatatactcttaccc
caattaacacagctaatgcaaagtgctgatgcgttagcagaattggatgtgctagcaaat
ttggccgaacgtgccgaaagcttagattaccactgccctgatttatgcccacaaagcggt
attcattttagccagggccgtcaccctgtggttgaacaagtatcagatgctccctttatt
gccaatcccattgaggtcaaccccaaccgcagaatgttggtaatcaccgggccgaacatg
ggcggtaaatcaacctatatgcgccaaacagcactaatcgtattgatggcctatataggt
agctatatccccgcacaagacgcaaaaataggccctatcgaccggatatttacccgcata
ggggcgtcggatgatttagcttcaggtcgctcaacgtttatggtcgagatgaccgaaacg
gccaacattttgaataatgcaaccgcaaacagcttggttttgatggatgagattggtcga
ggcaccagcacctatgacggcctgtcattggcttgggcttgtgctgaatacttagccact
aaattacagtcgtttacccttttcgccacgcactattttgaattaacaggcttggctgaa
gcgcttccagagctagctaatgtgcatttagatgccgtcgagcacggcgataccattcgc
tttatgcatgctgtacaagatggtgctgccaataaaagctatggcttacaagtagcgcaa
ctagctggggtgcccaaacaagtggtgcaagcagcgaaacgcaagttacatgaacttgaa
accggcgcatctgtgaagacatcagtagcaaggcctgaagcacagcctcaagccattaaa
gcggaagaaaaggtggaaactcaattagatttactcgggcaacctagtgaagcagaagaa
ttactttacagtattcaaccggatgatcttacccccaaacaagcgcttgaatatttgtac
caattaaaaaagttagcaaggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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