KEGG   Granulosicoccus antarcticus: IMCC3135_29690
Entry
IMCC3135_29690    CDS       T04938                                 
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase I
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
gai  Granulosicoccus antarcticus
Pathway
gai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IMCC3135_29690 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gai03019]
    IMCC3135_29690 (pcnB)
Enzymes [BR:gai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     IMCC3135_29690 (pcnB)
Messenger RNA biogenesis [BR:gai03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     IMCC3135_29690 (pcnB)
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_arg_C PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: ASJ75987
UniProt: A0A2Z2P5L3
Position
complement(6779509..6781182)
AA seq 557 aa
MIHPIKTRMQTQTEKRLLKRLTGLSRSALNKTRELLGAQPQPAAQAEASSAIAAEPASKP
RKRGKARSGKHSGPLIVPAGEHSVTRKSIGRSALKVLDKLHEAGHSAYLVGGGVRDALVG
LKPKDFDIATDASPETIRALFRNSRIIGRRFRLVHVVYGREIIEVATFRAAHSKGDGGEI
GKAGRIVRDNVFGSIEEDAYRRDFSVNALYYNIADGSVVDYVGGLADLKAGVFKLIGEPV
TRCKEDPVRVLRAVRLAAKLKFSIDEPTLAAMKQVRTELKSTPPPRLFEEVLKLFQGGYA
LRSFHSVREHDLLRYLFPMLDERLKAGDENLVSMLDAALTNTDRRVAQGKPITPAYLLAF
MLWPDVQEQAGRDCEAGMRINDALFTAADSVLSTQLRVISIPRRFSGPMKEIWQMQPRLE
RLTGGRALKLMEDRRFRAAYDFLCLRSNVDERLKASAKWWTRVQTLSEEQRIDAAANRPV
ADGIWPDKRGQGARSAEDADEDLEIDGGTPGKSIEAAATSKDAAGNAAKKPPRKRRRRRR
KPGGDKGSAGSSSPPAS
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgatacatccgatcaagactcggatgcagacgcagacggagaaacgattgcttaaacga
ctgaccgggctatcacgctcggcattgaacaagactcgcgagttactcggagcacagcca
cagccagcagcgcaagctgaggctagctcggcaatagccgcagaaccggctagcaaacca
cgcaagcggggtaaggcgcgttcaggcaagcacagcggccctttgatcgtgcccgctggc
gagcattctgttacccgtaaatccatcggacgctcggcactgaaggtgctggacaagctg
cacgaggcaggccactcggcctatctggtcggtggaggtgtgcgtgatgccttggtaggg
ttgaagccgaaagacttcgatatcgctaccgatgccagtcctgagaccatccgggccttg
tttcgtaactcgcggatcatcggtcggcgttttcgcctggtgcatgtggtgtacgggcgt
gaaatcatcgaagtggccaccttccgggctgctcacagcaagggcgatggtggtgagata
ggcaaggcaggtcgcatcgtgcgtgacaatgtgttcggctcgattgaagaggatgcctac
cggcgtgatttttctgtcaatgctctctactacaacatcgcagatggctctgttgtggat
tacgtcggtggtctggctgatctgaaggcgggtgtcttcaaactgattggtgagccggta
acgcgttgcaaggaagatcctgtcagagtgctgcgtgccgtacgtctggccgccaaactg
aaattctcaattgacgagcccactctggcggcaatgaagcaggttcggaccgagctgaaa
tcaacaccgcctccgcgcctgttcgaagaagttctgaagctgttccagggcggctatgcc
ttgcgcagttttcattcggttcgagagcacgatttactgcgctatctgtttccgatgctg
gatgaacgtctcaaggcgggcgatgagaacctggtcagcatgctggatgcagcactgacc
aatactgatcgtcgtgtcgcgcagggtaagcctattacaccggcctatctgttggccttc
atgctctggccggatgtgcaagaacaggcagggcgtgattgcgaagcgggtatgcgtatc
aatgatgctttgttcactgctgcagattctgtgttgtccacgcaactgcgtgtgatctcc
attccaaggcgattttcaggtcccatgaaggagatctggcaaatgcagccccggttggag
agactgaccggtggacgtgccctgaaattgatggaagatcgtcgctttcgggccgcctat
gacttcttgtgtctgcgttcgaacgtcgatgagcgtctcaaggccagtgccaaatggtgg
acccgggtacagacgctgagcgaagagcagcggatcgatgcggcggccaatcgccctgtg
gctgacggaatctggcccgataaacggggtcagggagcgcgttcggccgaagatgctgac
gaggatcttgaaattgacggcggcacgccgggcaaatcgatagaggcggctgcaacaagc
aaggatgctgctggaaatgcggcaaagaagccaccccgcaagcgacgtcgtcgtcgtcgc
aagccaggtggtgacaagggttcggcagggtcatcttcaccacctgctagctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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