KEGG   Gilliamella apicola: GAPWK_0232
Entry
GAPWK_0232        CDS       T03066                                 
Name
(GenBank) DNA polymerase III beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
gap  Gilliamella apicola
Pathway
gap03030  DNA replication
gap03430  Mismatch repair
gap03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GAPWK_0232
   03430 Mismatch repair
    GAPWK_0232
   03440 Homologous recombination
    GAPWK_0232
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gap03032]
    GAPWK_0232
   03400 DNA repair and recombination proteins [BR:gap03400]
    GAPWK_0232
Enzymes [BR:gap01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GAPWK_0232
DNA replication proteins [BR:gap03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GAPWK_0232
DNA repair and recombination proteins [BR:gap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GAPWK_0232
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3 CoV_S1
Other DBs
NCBI-ProteinID: AHN24809
Position
complement(239649..240752)
AA seq 367 aa
MKFIIDREKLIKPLQLVSAPLSSRPTLPILGNLLLQVSDNVLSMTSTDLEIEMISHLPLI
EANEPGATTVPAKKFLDICRNLPSNAQISITVDDNRLIIQSGRSKFSLTTLPASDFPNLE
NWQSDIDLSVPQKTIKRLIDAVQFSMANQDVRYYLNGMLFEIEDGLLKSVATDGHRLAFC
AQPVGQNISAACSVILPRKGVIELAKLVGDNEEPINIQIGNNNLRVNLGDFTFTSKLIDG
RFPDYKRVLPRNPDKPLEVSCDELRNALSRVAILSNEKFRGIRLYVHNNQIKITANNPEQ
EEAEELIDVKYESAELEIGFNVTYLLDILNTLKCDSVQLLLTDATSSVQIEDINDQSATY
VVMPMRL
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgaaatttattattgatcgcgaaaaacttatcaaaccattgcaacttgttagcgcacca
ctaagtagtcgtccgacgctaccaattttaggtaatttattattacaagtaagtgataat
gttttatcaatgacaagtacagatctcgaaattgaaatgatttctcatttacctttgatc
gaggcaaatgagcctggtgcaacaacggttcccgcgaaaaaatttctcgatatttgccgt
aatttgcctagtaatgctcaaatttcaataacggttgacgataatcgattaatcattcag
tctggtcgaagtaaattttctttaactacactacctgctagcgattttcctaatcttgaa
aattggcaaagtgacattgatctttccgttccacaaaaaaccataaaacgacttattgat
gcagttcaattctcaatggctaatcaagatgtaagatattatttaaatggtatgttattt
gaaattgaggatggtttattaaaatcggttgcaactgatggtcaccgcttagcattttgt
gctcaacccgttggacaaaatatctctgctgcttgttcggtaattcttccaagaaaaggt
gtaattgaacttgctaaacttgtaggtgataatgaggagccgattaatatccaaattgga
aataataatttacgcgttaatcttggtgatttcactttcacatcaaaattgattgatgga
agatttccagactataagcgagtactacctcgtaatccggataaacctctagaagtatca
tgtgatgaattaagaaatgcattatctcgggtagcaattttatctaatgagaaattccgc
ggaataagattgtatgtacataacaatcaaataaaaatcacagcaaataatccagaacaa
gaagaagctgaagaattgattgatgttaaatatgaatcagcagaacttgaaattggcttt
aatgtaacctatttattagatatattaaatacattaaaatgtgatagcgtacagctttta
ttaactgatgcgacatcaagtgttcagattgaagacattaatgatcaatcagccacttat
gttgttatgccaatgcgtttatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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