KEGG   Gilliamella apicola: GAPWK_2445
Entry
GAPWK_2445        CDS       T03066                                 
Name
(GenBank) DNA-directed RNA polymerase beta subunit
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
gap  Gilliamella apicola
Pathway
gap03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gap00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GAPWK_2445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gap03021]
    GAPWK_2445
   03400 DNA repair and recombination proteins [BR:gap03400]
    GAPWK_2445
Enzymes [BR:gap01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GAPWK_2445
Transcription machinery [BR:gap03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GAPWK_2445
DNA repair and recombination proteins [BR:gap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GAPWK_2445
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_2 PLC-beta_C
Other DBs
NCBI-ProteinID: AHN27018
Position
complement(2748031..2752059)
AA seq 1342 aa
MVYSYTEKKRIRKNFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSIFPIK
SYSGNAELQYVSFKMGEPVFDVKECQIRGITYSAPLRVKLRLVIYDKDAPEGTVKDIKEQ
DVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFARIDRRRKLPATIILRALGYETEEILDIFFEKTIFEVGKSKLKMD
LVPERLRGETALFDIESKGKVYAEKGRRITARHIRELDKDNVTKIDVPVEYIVNKVLAKN
YVNEATGEVIAFANTPISLELLLELTNAGHRKIETLFTNDLDHGPFISETLNVDSTRDRL
GALVEIYRMMRPGEPPTKEAAEALFDNLFFSDERYDLSAVGRMKFNRSLGREDIEGESVL
TKDDIVDVMKKLIGIRNGHGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLS
LGDLDSLMPQDMINAKPISAAIREFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLAVYSRTNEYGFLETPYRRVIDGVVT
DEINYLSAIDESEFVIAQANSNLDEDGRFKEDLVTCRLNGESGLYSPEQVHYMDVSTQQI
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLKAEKPFVGTGMERAVAVDSGVTAVARR
GGTVQYVDASRIVINVNDDEMYAGETGIDIYNLTKYTRSNQNTCINQIPCVELGEKVERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSEKVVQDDRFTSIHIQELSCIS
RDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDTSLRVPNGVSGTVIDVQVFTRDGVQKDKRALEIEDMQLKQARKDL
TEELNILEAALFARIRDVLIAGGIKAEKLDALPREKWLTIGIANEDKQAQLEQLAEQHEE
IKTEFNKKLEAKRMKITQGDDLQPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKIN
PIEDMPYDDKGRPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGQKIDTMLKEQQELAK
LREFIQKAYDLGLGAAQKVNVAEFTDQEVMTLAQNLRNGMPLATPVFDGAKEQEIKALLE
LGDLPTSGQITLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPAIP
ESFNVLLKEIRSLGINIELDEE
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggtttactcttataccgagaaaaaacgaattcgtaagaattttggtaagcgtccacaa
gtcttggatataccgtatcttctttctattcaacttgattcgttccagaaatttattgaa
caagatccagaaggtcaatatggcttagaagccgcatttcgttcaatatttccgataaaa
agttatagtggtaacgctgagttacaatacgtgagctttaaaatgggcgaacctgtgttt
gatgttaaagaatgtcaaattagggggatcacttactcagcaccgttgcgcgtaaaatta
cgtttagttatttatgataaagatgcgccagaaggaacagtaaaagatattaaagagcaa
gacgtctatatgggcgaaattcctttaatgacggacaatggtacgtttgtgatcaacggt
acagaacgtgtaatcgtatcacaattacatcgtagtccaggtgtgttctttgatagtgat
aaaggtaaaacacactcttctggtaaagttttatataatgctcggattattccttatcgt
ggctcttggcttgattttgaatttgatccaaaagataatctttttgctcgtattgaccgt
cgtcgtaaacttccagcaacaattattttacgagcactaggttatgaaacagaagaaatt
ttagatattttcttcgagaaaactatttttgaagtgggcaagtccaaactgaaaatggat
cttgttcctgaacgtttgcgtggtgaaacagctctttttgatatagaatcaaaaggtaaa
gtttatgctgaaaaaggtcgtcgtattaccgctcgccatatccgtgagttagataaagat
aacgttactaaaattgatgtacctgttgaatatatagttaataaagttttagctaaaaat
tatgtcaatgaggcgacaggcgaagttattgcttttgcaaatacaccaatctcattagag
ctattgcttgaattgactaatgctggtcatagaaagatcgaaacattatttactaatgat
cttgatcatggaccatttatttctgaaaccttaaatgttgattctacccgtgatcgatta
ggtgcattagttgaaatttatcgtatgatgcgccctggtgaaccgccaacaaaagaagca
gctgaagcgttatttgataatttattcttctctgatgagcgttatgatttgtccgctgtt
ggtcgaatgaaatttaatcgttctttaggtcgtgaagatatcgaaggtgaaagtgtttta
acaaaagatgatatcgttgacgtaatgaagaaattaatcggcattcgtaatggtcatggt
gaagttgatgatattgaccatttaggtaatcgtcgtattcgtagcgttggtgaaatggca
gaaaaccaattccggattggcttagttcgcgtagagcgagctgttaaagaacgtttatct
ttaggtgatttagattcactgatgccacaagatatgatcaatgctaaaccgatttcagcc
gcaatccgtgagttctttggttctagccaattatctcagtttatggatcaaaataatcca
ttatctgaaattacccacaaacgtcgtatttcagcattaggtccaggtggtttaactcgt
gaacgagcaggatttgaagtgcgtgacgtacatcctactcattatggtcgtgtatgtccg
attgagacacctgaaggtccaaacattggtttgattaattctttagcagtttattctcgt
actaatgaatatggtttcttagaaacaccatatcgtcgagtgattgatggtgttgtaact
gatgaaattaattatttatcagcgattgatgaaagcgagtttgttattgctcaggctaac
tcgaatcttgatgaagatggacgttttaaagaagacttagttacttgccgtttaaatggt
gagtcaggtttatatagtccagaacaagttcactatatggacgtatcaactcagcaaatt
gtatcggttggtgcttcgttaattccattcttagagcatgatgatgcgaaccgtgcttta
atgggtgcgaacatgcaacgtcaagcggtaccgacattaaaagcggaaaaaccatttgtt
ggaactggtatggaaagggctgtagcggttgactcaggtgtaactgcagtagctcgtcgt
ggtggtactgttcaatatgttgatgcatcacgcattgtaattaatgttaatgatgatgaa
atgtacgctggcgaaacaggtattgatatttataacttaactaaatatacccgttctaac
caaaatacttgtatcaaccaaattccatgtgtggaattaggtgaaaaagttgaacgaggc
gatgttcttgctgacggtccatcaactgatttaggtgaattagcattaggtcaaaacatg
cgcgtggctttcatgccatggaacggttataactttgaggattctattttagtctctgaa
aaagttgtgcaagatgaccgttttacttcgattcatattcaagaactatcttgtatctca
cgagatactaaattaggtgctgaagaaatcacagccgatattccaaatgtaggtgaagct
gctctttctaaacttgatgaatcaggtattgtttatattggagctgaagttaagggcggt
gatattctggttggtaaagtgacaccaaaaggtgaaactcaattaactccagaagaaaaa
ctactgcgtgcgatttttggtgagaaagcgtctgatgttaaagatacttctttacgtgtg
ccaaatggtgtttctggtacagtaattgatgttcaagtctttacgcgtgatggtgtacaa
aaagataaacgtgcacttgaaattgaagatatgcaattaaaacaagcacgcaaagattta
actgaagaacttaacattttagaagccgctttgtttgctcgtattcgtgatgtattaatt
gctggtggtattaaagctgaaaaattagatgctttaccacgtgaaaagtggttaacaatt
ggtattgcgaacgaagataaacaagctcaattagagcagcttgcagaacagcacgaagaa
atcaaaactgaatttaacaaaaaacttgaagctaaacgcatgaagatcacccaaggtgat
gatttacaacctggtgtgttaaaaattgttaaagtttatttagctgttaaacgtcaaatc
cagcctggggataaaatggctggtcgtcatggtaacaaaggggttatctctaaaattaac
ccaattgaagatatgccatatgatgacaaaggccgtccggttgatatcgtattaaatcca
ctgggggttccatcacgtatgaatatcgggcagattctagaaactcacttaggtatggcg
gctaaaggtattggtcagaagattgacactatgctgaaagaacagcaagaattagctaaa
ttacgtgaatttatccaaaaagcatatgaccttggtttaggtgcagcacaaaaagttaat
gttgctgaatttactgatcaagaagtcatgacactagcacagaatttacgtaatggtatg
ccacttgctacacctgtatttgatggtgctaaagagcaagaaattaaggcattacttgag
cttggcgatctaccaacttctggacaaattacgttgtatgatggtcgtacaggtgaacag
tttgaacgtcctgtaactgttggttacatgtatatgctcaaattgaaccacttggttgat
gacaaaatgcatgctcgttctacaggttcatacagtctggttactcagcaaccattgggt
ggtaaagctcaattcggtggtcagcgtttcggtgagatggaagtatgggcgcttgaggca
tatggtgctgcttataccttacaagaaatgttaactgttaagtcagatgacgtgaacggt
cgtactaagatgtacaaaaatattgtagatggtgatcatcgtatggaacctgcgatacca
gaatcatttaatgtattgttaaaagagattcgttcgttaggtattaatatagagttagac
gaagagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

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