KEGG   Gemmatimonas aurantiaca: GAU_0002
Entry
GAU_0002          CDS       T00878                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
gau  Gemmatimonas aurantiaca
Pathway
gau03030  DNA replication
gau03430  Mismatch repair
gau03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GAU_0002 (dnaN)
   03430 Mismatch repair
    GAU_0002 (dnaN)
   03440 Homologous recombination
    GAU_0002 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gau03032]
    GAU_0002 (dnaN)
   03400 DNA repair and recombination proteins [BR:gau03400]
    GAU_0002 (dnaN)
Enzymes [BR:gau01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GAU_0002 (dnaN)
DNA replication proteins [BR:gau03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GAU_0002 (dnaN)
DNA repair and recombination proteins [BR:gau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GAU_0002 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_2 DNA_pol3_beta_3 Ybfg_C
Other DBs
NCBI-ProteinID: BAH37044
NITE: GAU_0002
UniProt: C1A3G7
Position
1753..2865
AA seq 370 aa
MKFTISREKLQEGLQAVTAAVPAKTTLPVLANLLVETTDRGIRFSATDLDIAVSTEVSAD
VETPGAITIPAKKLGEIARELPPSPVKISASGEQRVTLECGRSKFKLLGLPRDEFPTFPS
VRFNDSWRVKSGELQKLISHTAFAVSNEESRPILNGVLWELREERMRMVATNGHRLAKME
LPVEASSAPPGDLIVPPKALEQIRRLFPAEEELEIARGDNHLGFRSPFTSVFTRLVEGPY
PNYEQVIPKDNDRYALADKAALTSALKRMSVIASDQTHRIKMSFNSGMLKFSVTTPDLGE
ASDELPINYTGDQLDIGFNATYLLEILRFMPTEQVRLTFKAPERAATIEPEGWDDPAKYL
CLVMPLRLMD
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaagttcacgatctcgcgtgagaagctgcaggaaggccttcaggccgtaactgctgcc
gtgccggccaagaccaccttgcccgtcctggccaacctgctggtcgaaacgaccgaccgt
ggcattcgcttctctgcgaccgacctcgatatcgcggtcagcaccgaagtcagcgcggat
gtcgagacgcccggtgccatcaccattccggccaagaagctcggcgagattgcgcgcgag
ttgccgccgtcgcccgtgaagatctcggccagtggtgagcagcgcgtcacgctcgaatgc
ggtcgctccaagttcaagctgctcggattgccgcgcgacgaattcccgaccttccccagc
gtccggttcaacgactcctggcgcgtgaagtccggcgagttgcagaagctcatctcgcac
accgccttcgcggtgagcaacgaggagtcccgtccgattctcaacggcgtgctgtgggag
ctgcgggaagagcggatgcgcatggtggccaccaatggtcaccggctggccaagatggaa
ctgcctgtagaggccagcagtgccccgccaggcgatttgatcgtgccccccaaggccctg
gagcagatccgccgtcttttcccggcagaagaggagctggagatcgcacgcggcgataac
cacctgggcttccgttcgccgttcacttccgtcttcacccgcctcgtcgaagggccgtat
cccaactacgagcaagtgatcccgaaggacaacgatcggtacgcgttggccgacaaggcg
gcactcaccagcgcgctcaagcgcatgagtgtcattgcgtccgatcagacgcaccggatc
aagatgtcgttcaattcgggcatgctgaaattcagcgtgaccacaccggatctgggcgaa
gccagcgatgaactgccgatcaattacacgggtgatcagctcgatatcggcttcaacgcc
acctatctgctcgagatcctgcgtttcatgcccaccgagcaggtgcgcctgacgttcaag
gcaccggaacgtgcggccaccatcgagcccgaaggctgggatgacccggccaagtatctc
tgcctggtgatgccgctgcgcctgatggattga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (63)   
   KEGG ORTHOLOGY (1)   
   RefGene (59)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (77)   

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