KEGG   Gordonia alkanivorans: C5O27_13590
Entry
C5O27_13590       CDS       T05876                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
gav  Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:gav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gav03016]
    C5O27_13590
Enzymes [BR:gav01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     C5O27_13590
Transfer RNA biogenesis [BR:gav03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    C5O27_13590
 Prokaryotic type
    C5O27_13590
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2
Other DBs
NCBI-ProteinID: AZZ81970
UniProt: A0A3T0V0P4
Position
2991002..2991922
AA seq 306 aa
MADATIEKAGLLIVDKQAGITSHDVVSRCRKIFDTRRVGHAGTLDPMATGVLVVGIERAT
KLLGLLSLTTKSYTATIRLGASTTTDDREGEILTTADASGVTDDEIASGVADLTGDIQQV
PAKVSAIKVDGRRAHALVRTAADFDLEARPVTVSRFDVLATRRDGDTDNGTPGVVDLDVA
VDCSSGTYIRSLARDLGAALGVGGHLTALRRTAVGPFTLEHARTLDEVREDGRVSLDIDE
AVKLSFPRRDISDDEAESISQGRWLEPIGMKGVYVVVDPHEQAIALIQEKGKRASSVMVV
RPATLR
NT seq 921 nt   +upstreamnt  +downstreamnt
atggccgacgcaaccatcgagaaggccggcctgctcatcgtcgacaagcaggccgggatc
accagccacgacgtcgtgtcgcggtgccgcaagatcttcgacacccgccgggtcggccac
gccggcaccctggacccgatggccaccggcgttctggtcgtcgggatcgagagggcgaca
aagcttctcggcctgctgtcgttgaccaccaagtcctacacggcgaccatccggctgggc
gcctcgaccaccaccgacgaccgcgagggggagatcctcaccaccgcggacgcctccggt
gtgaccgacgacgagatcgcctcgggcgtcgccgatctcaccggcgacatccagcaggtc
ccggcgaaggtgtcggcgatcaaggtcgacggccggcgagcgcacgccctggtccgcacc
gccgccgacttcgacctcgaagcccgcccggtcaccgtgtcgcgattcgacgtgctcgcc
acccgacgcgacggtgacaccgacaacggcaccccgggcgtggtggatctcgatgtcgcg
gtggactgttcgtcgggtacctacatccggtccctggcccgtgacctcggcgccgcactg
ggggtcgggggacacctcaccgcactccgacgcaccgcggtcggacccttcacccttgaa
cacgcccgcacgctcgacgaggtccgcgaggacggccgcgtcagcctcgacatcgacgag
gccgtgaagctgtccttcccgcgccgcgacatcagcgacgacgaggccgaatccatcagc
cagggacggtggctcgagccgatcggcatgaagggcgtctacgtggtcgtcgacccgcac
gagcaggccatcgcgctgatccaggagaagggcaagcgggcgagttcggtgatggtggta
cgacccgcgaccctgcgttag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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