KEGG   Gordonia alkanivorans: C5O27_14590
Entry
C5O27_14590       CDS       T05876                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
gav  Gordonia alkanivorans
Pathway
gav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C5O27_14590
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gav03400]
    C5O27_14590
DNA repair and recombination proteins [BR:gav03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C5O27_14590
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2 HHH GIY_YIG_domain
Other DBs
NCBI-ProteinID: AZZ82144
UniProt: A0A3T0V139
Position
3204205..3206298
AA seq 697 aa
MADPTTYRPAPGTIPTDPGVYKFRDEHGRVIYVGKAKNLRSRLTSYFADIASLHPRTRQM
VTTAASVEWTVVGTEVEALQLEYNWIKEFDPRFNVRYRDDKSYPMLAVTLNEAYPRLFVY
RGPRRRGVRYFGPYAHAWAIRETVDLLTRVFPARTCSAGVFKRHRQIDRPCLLGYIDKCS
APCIGRVDAEEHREIVEDFCDFLAGRTDLLIRKLERDMSAAAEDLDFERAARLRDDIGAL
RRAMEKQAVVLGDGTTADVVAIAGDDLEVSVQVFHVRDGRVRGQRGWVVERSDNGTDGDV
IGEFITQFYGAQVDFDATVDVGADRAHGESVPREVLVPELPADTAELEEWLSGLRGSRVT
LRVPQRGDKKALFETVARNAGEALTQHKLRRAGDLTTRSAALTELQENLMLDQAPLRIEC
VDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIRHAAGDGHSDDVASIAEVTRRRFLRHR
ADRDAPPPESGEVDAEPQTSAQPRKFAYPPNLFVVDGGAPQVHAAAAVLDELGVTDVSVI
GLAKRLEEVWVPGEDDPMILPRSSQALFLLQRVRDEAHRFAITFHRSKRSKRMTASALDG
IPGLGKTRRTALVTHFGSVARLREASLEEIAQVPGIGLTTARAVQDALGGDTVVETVPES
EVEPESEVVPVETVVSETVNEAEMTVVTGDAGRGVDE
NT seq 2094 nt   +upstreamnt  +downstreamnt
gtggccgacccgactacctaccgtcctgctcccggaaccatcccgaccgatcccggggtg
tacaagttccgtgacgagcacggtcgtgtcatctacgtgggcaaggccaagaacctccgg
tcgcgtctgacgtcgtacttcgccgacatcgcctcgctgcacccgcgcacccgtcagatg
gtgacgacggcggcgtcggtggagtggaccgtcgtgggcaccgaggtcgaggcacttcag
ctcgaatacaactggatcaaggaattcgatccgcggttcaacgtccgctatcgcgacgac
aagagctacccgatgctcgccgtgaccctcaacgaggcgtacccgcggctgttcgtctac
cgcggaccccgccgccgtggcgtgcgctacttcgggccgtacgcgcatgcgtgggcgatc
cgcgagaccgtcgacctgctgacgcgggtgttcccggcgcgcacctgctcggcgggcgtg
ttcaagcggcaccgccagatcgaccggccgtgtctgctcggctacatcgacaagtgctcc
gcgccctgtatcggccgggtcgacgccgaggaacaccgcgagatcgtcgaggacttctgc
gacttcctcgccggccgcaccgacctgctgatccgcaagctcgaacgtgacatgtccgct
gcggccgaggatctcgatttcgaacgcgcggcccgcctgcgcgacgacatcggcgccctc
cgacgcgccatggagaagcaggccgtggttctcggcgacggcaccaccgccgacgtcgtc
gcgatcgccggagacgacctcgaggtgtcggtacaggtcttccacgtgcgcgacgggcgc
gtccgcggtcagcgcgggtgggtcgtcgaacgcagtgacaacgggaccgacggcgacgtc
atcggcgagttcatcacccagttctacggtgcgcaggtcgatttcgacgccaccgtcgac
gtcggtgcggaccgcgcacacggcgagtccgttccgcgcgaggtcctggtccccgaattg
ccggccgacacagccgaactcgaggagtggctgagcgggctgcgggggagcagggtcacc
ttgcgggtgccccagcgcggcgacaagaaggcgctgttcgagaccgtcgcccggaacgcg
ggggaggcgctcacccagcacaagctccgacgcgccggtgacctcaccacccggtcggcc
gccctcaccgaactgcaggagaacctgatgctcgaccaggcgccgctgcgcatcgagtgc
gtcgacatatcgcatgtgcagggcaccgacgtcgtggcttctctcgtcgtcttcgaggac
ggtctgccgcgcaagtccgactaccgccactacgcgatccgccatgccgccggcgacggc
cactccgacgacgtcgcatcgatcgccgaggtcacccgccgccgcttcctccggcatcgc
gccgaccgtgacgcaccgccgcccgagtcgggggaggtcgacgccgaaccgcagacctct
gcgcagccacgaaagttcgcgtacccgcccaatctgttcgtcgtcgacggcggtgcgcct
caggtgcatgccgcggcggcggttctcgacgagctcggtgtcaccgacgtctcggtgatc
ggactcgccaaacgcctcgaggaggtgtgggtgcccggtgaggacgacccgatgatcctg
ccgcgaagcagccaggcgctgttcctgctgcagcgtgtgcgcgacgaggcacaccggttc
gccatcaccttccaccgcagcaagcgcagcaagaggatgaccgcctcggcgctcgacggc
atcccgggtctggggaagacacgacgcaccgcgctggtgacccacttcgggtcggttgcg
cgcctgcgtgaggcatccttggaggagatcgcccaggtgccggggatcggactgaccacg
gcgcgtgcggtgcaggacgcgctcggcggtgacaccgttgtcgagacggtgcccgagtcc
gaggtggagccggagtccgaagtggtgccggtggagacggtggtgtccgagacggtgaac
gaagcagagatgacggtggtgaccggtgacgcgggacggggtgtcgatgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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