KEGG T03155: GbCGDNIH3

Granulibacter bethesdensis NIH3.1: GbCGDNIH3_0582

Entry

GbCGDNIH3_0582    CDS       T03155

Name

(GenBank) Ribosomal large subunit pseudouridine synthase C

K06179

23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]

Organism

gbc Granulibacter bethesdensis NIH3.1

Brite

KEGG Orthology (KO) [BR:gbc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gbc03009]
    GbCGDNIH3_0582
Enzymes [BR:gbc01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     GbCGDNIH3_0582
Ribosome biogenesis [BR:gbc03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    GbCGDNIH3_0582

SSDB

Motif

Pfam:

PseudoU_synth_2 S4

Other DBs

NCBI-ProteinID:

AHJ62361

Position

658788..659888

AA seq 366 aa
MLREQVLRGHNRLCALRRVSAVVSPIRNTTIMSVTTRQVTDDEADIRLDRWFRRHYPSLT
QVAIQKMCRTGQIRVDGARAEAATRLQPGQSVRIPPLKVPSAAEQEGEGPRALDPIQQKE
LESWILYKDDHLIVLNKPSGLPSQGGPGITRHLDGLLDGLRFGREDRPRLVHRLDRDTSG
VIVIARSPGVAAKLAALFRTRETEKVYWAVVAGRPVPVEGRIDRPLLRQNDRNEPVVLAD
RKDRDKVTAITDYRTLDHAARKLAWLELRPLTGRMHQLRVHCAAMDAPILGDERYGSWRN
TDERGVRNTALVEGLSRRLHLHARRLSLPHPAGGILSVEADLSPHMAETFETLGFTAPKA
REGRLR

NT seq 1101 nt +upstreamnt +downstreamnt
atgttgcgggaacaggtgctccgggggcacaaccgcttatgcgcgctgcgccgtgtttcc
gcggtcgtcagcccgatcaggaatacgacgatcatgagtgtgacgacacggcaggtaacg
gatgatgaagcggatatccgccttgatcgctggtttcgccgccattatccgagcctgacg
caggttgcgatccagaaaatgtgccgtaccggccagatcagggtcgatggggcacgggcc
gaagcggccacgagactacagcccggccagtcggtgcggattccgccgctgaaagtgccc
tccgctgccgagcaggagggggaagggccacgcgccctcgatccgatccagcagaaggaa
ctggagtcctggattctatataaggacgaccatctgattgtcctgaacaagccctccggc
ctgcccagtcagggtggccccggcattacccgccatctggatggtttgctcgacgggctg
cgtttcggtcgggaggaccggccgcgtctggtgcatcggctggatcgtgacacatctggt
gtcatcgtcattgcccgttcccccggtgtggcggccaagctcgcggctttgttccgtacg
cgcgagacggagaaggtctattgggccgtggtggcaggccgcccggtgccggtagagggg
cgtatcgaccgtcctttgctgcgccagaacgaccgcaacgagccggttgtgctggccgat
cgcaaagaccgtgacaaggtaaccgcgatcaccgattaccgcacacttgaccatgccgca
cggaaactggcctggctggagttgcgtcctttgacggggaggatgcatcaactgcgtgtg
cattgcgcggcgatggatgcgcctattctgggcgatgagcgctatggcagctggcgtaac
accgatgagcgcggggttcgcaacaccgcactggtggagggattatcccgccgcctgcac
ctgcatgcgcggcggttgagcctgccgcatccggcgggtggcattctctcggtggaggcc
gatctgtcgccgcatatggcggagacattcgaaacactcggctttaccgcaccgaaagcc
agagagggccggttacggtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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