KEGG   Granulibacter bethesdensis NIH3.1: GbCGDNIH3_0683
Entry
GbCGDNIH3_0683    CDS       T03155                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
gbc  Granulibacter bethesdensis NIH3.1
Brite
KEGG Orthology (KO) [BR:gbc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gbc03032]
    GbCGDNIH3_0683
   03036 Chromosome and associated proteins [BR:gbc03036]
    GbCGDNIH3_0683
   03400 DNA repair and recombination proteins [BR:gbc03400]
    GbCGDNIH3_0683
DNA replication proteins [BR:gbc03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    GbCGDNIH3_0683
Chromosome and associated proteins [BR:gbc03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    GbCGDNIH3_0683
DNA repair and recombination proteins [BR:gbc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      GbCGDNIH3_0683
SSDB
Motif
Pfam: Bac_DNA_binding HU-CCDC81_bac_2 HU-CCDC81_bac_1
Other DBs
NCBI-ProteinID: AHJ62468
Position
778000..778302
AA seq 100 aa
MPTLATNKGILMSKAFIAQVIQDSAELTGVAANRTANDLITAIVKEMKKNGKFTLPSFGT
FTVRKTKARKGLNPRTGEQIKVKAGKTVRFKASPNLKKSV
NT seq 303 nt   +upstreamnt  +downstreamnt
ttgccaacgcttgcgacaaataaggggattttgatgtctaaggcttttattgcccaggtt
attcaggacagcgccgagctgactggggtggcggcaaaccgcacggcgaacgatcttatc
acggcgatcgtgaaggaaatgaagaagaacggcaagtttacactgccgagcttcggcacc
tttactgtcagaaagaccaaggcgcgcaagggtctgaatccgcggacaggggagcagatc
aaggtcaaggctggaaagacagttcgtttcaaggcctctccgaatctgaaaaaatctgtc
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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