KEGG   Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1101
Entry
GbCGDNIH3_1101    CDS       T03155                                 
Name
(GenBank) Holliday junction DNA helicase ruvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
gbc  Granulibacter bethesdensis NIH3.1
Pathway
gbc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    GbCGDNIH3_1101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gbc03400]
    GbCGDNIH3_1101
Enzymes [BR:gbc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GbCGDNIH3_1101
DNA repair and recombination proteins [BR:gbc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     GbCGDNIH3_1101
    RecFOR pathway proteins
     GbCGDNIH3_1101
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 AAA_16 AAA_22 Mg_chelatase AAA_3 nSTAND3 Rad17 AAA_14 AAA_18 DUF815 TsaE NB-ARC NACHT NTPase_1 AAA_33 AAA_2 AAA_24 RNA_helicase AAA_17 Bac_DnaA bpMoxR ABC_tran AAA_28 IstB_IS21
Other DBs
NCBI-ProteinID: AHJ62928
Position
1251719..1252798
AA seq 359 aa
MPEHDPHQENRTVSSVRLEDDAAEASLRPQSLSEFIGQRASRENLSIFIQAAKVRGEAMD
HVLLHGPPGLGKTTLAQIVSRELGVGFRATSGPVIQRAGDLAAILTNLQPRDVLFIDEIH
RLQPAIEEVLYPAMEDFQLDLIIGEGPAARSVRIDLAPFTLVAATTRAGLLATPLRDRFG
IPLRLIFYTASELELIVSRGAEKLGFDLSREGAAEIARRSRGTPRIAGRLLRRVRDFAMV
QGVSPVDRSTADAALQRLEVDSLGLDAMDRRYLHRIAVHHAGGPVGVETLAAALAEARDT
LEDVIEPYLIQEGLILRTSRGRMLGEAGWRHLGLVPPPSAAGGQPDMLTLLHRDGSADE
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgcctgaacacgatcctcaccaggagaaccggaccgtcagcagtgtccggttggaggat
gatgcggcggaagcctccctgcggccgcagtccctgtctgaatttatcggccagcgggcc
agccgggaaaatctctccattttcattcaggccgcaaaagtgcgtggagaagcgatggac
catgtcctgctgcatgggccgccgggattgggcaagaccacgctggcgcagattgtctcg
cgggagttgggggtcgggtttcgcgctacctccgggcccgtgatccagcgggcaggggat
ctggcggcgattctgaccaatcttcagccgagagacgttctgttcattgatgaaattcat
cgccttcaacccgcgatcgaggaagtgctctatccggccatggaggattttcagctcgat
ctgatcatcggtgagggaccggcggcgcgctcggtacggattgatctggcaccctttacg
ctggttgcggcgacgactcgggcggggctgctggcgacaccgttgcgggatcggttcggc
atcccgctgcgcctgattttctatacggcctccgagctggaactgatcgtgtcgcgaggt
gcagaaaagcttggttttgatctgagccgggaaggggctgcggaaattgcccggcgctcc
cgcgggacaccacgtattgcgggacgattgctacgccgggtgagggatttcgcgatggtt
cagggtgtttcccctgtcgatcgctccaccgccgatgcggcccttcagcggctggaggtg
gattcgctggggctggacgcgatggatcggcgctatctgcaccggatcgcggtgcatcat
gccggtggaccggtcggggtcgagacattggcggcggctctggccgaggcgcgcgatacg
ctggaagatgtcatcgaaccttatctgattcaggaagggctgattctgcgcaccagccgt
gggcgcatgctgggtgaagcgggctggcggcatcttgggctggtgcctcccccatcggca
gcgggcggccagccggatatgctgaccctgttgcatcgcgatggcagtgcagatgaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (29)   
   Pfam (29)   
All databases (38)   

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