KEGG   Granulibacter bethesdensis NIH3.1: GbCGDNIH3_1221
Entry
GbCGDNIH3_1221    CDS       T03155                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
gbc  Granulibacter bethesdensis NIH3.1
Pathway
gbc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GbCGDNIH3_1221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gbc03400]
    GbCGDNIH3_1221
DNA repair and recombination proteins [BR:gbc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GbCGDNIH3_1221
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GbCGDNIH3_1221
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 BCA_ABC_TP_C AAA_16 AAA_25 DnaJ_CXXCXGXG AAA_23 nSTAND1 AAA_21 DUF4350
Other DBs
NCBI-ProteinID: AHJ63022
Position
1352038..1355001
AA seq 987 aa
MIYCCYPCGTFPEHFPCRCCFCPLLSCRIDRMAGSIRVRGAREHNLKNVDIDIPRDSLTV
ITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLELAGKPDVDSIEGLSPAISIEQK
TTSRNPRSTVGTVTEIHDYMRLLWARAGVPYSPATGLPIEAQTISQMVDRVLDMPSGTRL
LLLAPVVRDRKGEYRKELAELQRRGFTRVKVDGELYDIGDVPALNRKLKHTLEAVVDRVV
VKAGLQQRLADSFETALGLSDGIVYAEDATSGERTVFSSRFACPVSGFTIEEIEPRLFSF
NSPHGACPACDGLGVENFFDPDLVVPNERLSLKEGAIAAWSGAASPYYDQTLMALAAHYG
VDPRTAWEELPDICRNGILFGTEEDVSITYKDGVRSYTVKRPFEGVIRNLERRLRETDSV
WVREELSRYQAEKPCHVCDGARLKPEALAVKINSKDIAAASDLSIRDALPWFQSVLASLT
PQRAEIARRILREIEDRLQFLLDVGLDYLTLARSSATLSGGESQRIRLASQIGSGLTGVL
YVLDEPSIGLHQRDNDRLLGTLRRLKSLGNTVLVVEHDEDAIRAADHLIDMGPGAGVNGG
HVIACGTPQEVAKHPDSLTGAYLSGRAAIAVPQQRRPIQKKRMLTLVGAKGNNLKNVTAH
FPLGTFTCITGVSGGGKSTLVVDTLYKLTARRLMGAAQVPAPYERIEGLELLDKIIDIDQ
SPIGRTPRSNPATYTDLFAPIREWFAELPESRARGYKAGRFSFNVKGGRCEACQGDGVLK
IEMHFLPDMFVTCDTCKGKRYNRETLEVKFRDKSIADVLDMSVDEAVPYFSAANRIHDRL
KILQQVGLGYVKLGQQATTLSGGEAQRVKLSKELARRATGRTLYILDEPTTGLHFEDVRK
LLDVLHTLVDQGNTVIVIEHNLEVIKTADWILDLGPEGGDGGGRIVAEGTPEQIAASPES
HTGRFLAPLLAKPTASPRRINRKRAAE
NT seq 2964 nt   +upstreamnt  +downstreamnt
gtgatttactgttgctatccatgcggaacttttccagaacattttccttgtcgttgctgt
ttctgccccctcctctcgtgtcggattgatcgtatggccggttccattcgtgtgcgcggt
gcccgcgagcacaacctgaaaaacgttgatattgatattccacgggatagcctgacggtt
atcaccggactgtccggctccggcaaatcatcactggccttcgatacgatctatgccgaa
gggcagcggcgttacgtcgaaagcctgtccgcttatgcaagacagtttctggaactggcg
ggcaaaccggatgtagacagtatcgagggcctttcccccgctatctcgatcgagcagaag
accaccagccgcaatccccgctctacggtcggtacggtaacggaaatccacgattatatg
cgtcttctctgggcgcgcgcaggcgttccctactctcccgcgaccgggctgccgatcgag
gcccagaccatcagccagatggtggaccgggtgctggacatgccatcgggcacgaggttg
ttgctgctggcgccggtggtgcgcgaccgtaagggggagtaccgcaaggaactcgccgag
ttgcagcgccgtggctttacacgcgtcaaggtggacggggaattatacgatattggcgat
gtccctgccctgaaccggaagctcaagcatacgctggaagcagtggtggatcgcgtggtg
gtcaaggcgggactgcaacagcgcctggccgacagtttcgaaaccgcgttggggctgtct
gacggaatcgtctacgccgaagatgcgaccagcggagaacgcacggtcttttcctctcgc
ttcgcctgcccggtcagtggctttaccattgaggagatcgagccacgcctgttcagcttc
aactccccacacggtgcctgcccggcctgtgacgggctgggggtcgagaatttcttcgat
cccgatctggtcgtgccgaatgaacgactcagcctcaaggagggtgccattgcggcatgg
tccggtgcggccagcccttactacgatcaaacgctgatggctctggctgcgcattatggc
gtcgatccacgtaccgcgtgggaagaactgccagatatatgtcgcaacggcattctattc
ggcaccgaagaggatgtttccattacctataaggacggggtgcgcagctatacggtcaaa
cggccattcgaaggtgtcatccgcaatctggaacgccgtctgcgcgagaccgacagcgta
tgggtgcgggaggaactgtcgcgttatcaggccgaaaaaccttgccatgtctgtgatggt
gcccggctcaagccggaagctctggccgtcaagatcaatagcaaggacattgcagcggcc
tcggatttgtcgatccgcgatgcgctgccctggttccaatccgtgctggccagtctgacc
ccgcaacgggccgaaatcgcccggcgcattctgcgtgagatcgaggaccggcttcagttt
ctgctggatgttggactcgattatctgacccttgcacgatcctccgccaccctgtccggg
ggagagagccaacgcatccggctggcaagccagatcggctctggcctgacaggggtgctc
tatgtgctcgacgaaccgtccatcgggttgcaccagcgtgataatgaccggctgctcggc
acgctccggcgactgaaatcactcggcaacactgtgctggtggtcgagcatgacgaagat
gcaatccgtgctgccgaccatctgattgatatggggccgggcgcgggcgtcaatgggggg
catgtgatcgcctgcggcaccccgcaggaggtcgcgaaacatcccgatagtctgacaggc
gcctatctgtcaggccgtgccgcgatcgccgttccccagcagcgccgtccaattcagaag
aaacggatgctgacgctggtgggagcaaagggcaataacctcaaaaatgtcacggcgcat
tttccattgggaacttttacctgcatcaccggcgtgtccggtggcgggaaatctacgttg
gtggttgatacgctctacaagctgaccgcaagacggttgatgggggcggctcaggtgcct
gcgccgtatgagcggatcgagggactggaactgctcgacaagatcatcgacatagaccag
tccccgatcggacgcacgccgcgttccaatccggccacctatactgatctgttcgccccg
atccgggaatggttcgccgaattgccggaaagccgggcacgaggctacaaggcaggccga
ttcagcttcaatgtcaaaggcggtcgctgtgaagcatgtcagggcgacggggtgctgaaa
atcgagatgcacttcctgccggatatgttcgtcacctgcgatacttgtaaaggcaaacgg
tataatcgtgagacgctggaagtaaaattccgcgacaaatccattgccgacgtgctggat
atgtcggtcgatgaggcggtgccctatttcagtgccgcaaaccgtatccatgaccggttg
aaaatcctgcaacaggtcgggttgggatatgtaaagctgggtcagcaggccaccacgctt
tctggcggtgaggcacagcgtgtgaaattgtccaaggaactcgcccgccgtgcgaccggg
cggacgctgtatatcctcgacgaacccaccaccggcctgcatttcgaggatgtccgcaag
ctgctggatgtgctgcacacgctggtcgatcagggcaatacggtcatcgtgatcgaacac
aatctggaagtcatcaagacagcggactggattctggatctcggtccggaaggcggggat
ggcggcggacgaattgtggcggaaggaacgcctgaacagattgcggcctctcccgaaagc
cataccgggcgttttctggctccgcttcttgcgaaaccaaccgcgtccccacgccggatc
aaccgcaagcgggccgctgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (20)   

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