KEGG   Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_0416
Entry
GbCGDNIH2_0416    CDS       T03083                                 
Name
(GenBank) DNA mismatch repair protein mutS
  KO
K03555  DNA mismatch repair protein MutS
Organism
gbh  Granulibacter bethesdensis CGDNIH2
Pathway
gbh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gbh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    GbCGDNIH2_0416
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gbh03400]
    GbCGDNIH2_0416
DNA repair and recombination proteins [BR:gbh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     GbCGDNIH2_0416
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_29 AAA_30
Other DBs
NCBI-ProteinID: AHJ67428
Position
complement(469865..472645)
AA seq 926 aa
MLAEKMGAITLHCMPVASTPTRRGRPPGSSAARASNGAGSEAATAIPAGATPAMAQWFVL
KNQHPDALLFFRMGDFYELFFQDAENAAATLDIQLTKRGLHEGEPIPMCGVPVHAAEMYL
SRLIRRGWRVAIVEQMENPKNRAGKGPIRRDVVRLVTPGTITEETLLDAGRPNLLLAITQ
SGNRLGAAWLDISTGLFETESLDESGLTALLGRLDPAEILCPSSLHLEMWDARRGPEQPV
SDPANARARLAEAYDVSHINVFGSFTDAEAMAAMQALDYVRDAQMGALPRLGHPVPVGEA
GRLAMDASTRASLEIDRARDGGTERTLLSAVQRTLTPAGGRMLAAWLGAPLTDRTVITAR
QDGWGWLLEQPTLSMRLRETLRGCPDMARALGRIALGRGTPRDLAAIRDGAHIAMEAAGL
LEGILPSALAELHAALHLPPDLPEMLEAALADPVPARIEDGGVIASGFDGELDAERGLRD
DSRKVIAALQTEYAQRYGVASLKIRHHAQLGYMIEVPAVAVETLRTVPELILRQGMANGA
RFTHPDLSELDRRITEAAERARQREMIVITALRQKVEAHAGSIAACAEALARLDVLQSAA
RLAESGTWCRPVMTDDQTLTIEAGRHPVVEAALEGGPTPFMPNDTDLSASRRVMLLTGPN
MAGKSTYLRQNALIVILAQAGLPVPARAAHIGIVDRLFSRVGASDDLARGQSTFMVEMTE
TAAILHQAGPRSLVVVDEIGRGTSTLDGLAIAWAVLEALHSRIGARTIFATHFHELARLQ
GELPMLRPYTMKVQEWRGKVVFLHEVAEGAGGRSWGVHVAKLAGVPAATVRRAGQLLTAL
EERSVGLTDNATLPLFAASHGNETETEPAEGIHEAKPASLPPELIEALGQMEPDKLTPRE
ALDLMYHFKSMLSSQAHNGDVEAESW
NT seq 2781 nt   +upstreamnt  +downstreamnt
atgctggccgaaaaaatgggagccattacactgcattgcatgcccgttgcatcgactccc
acacgccggggccgtccccccggaagcagtgccgcccgtgcctccaacggggccggcagt
gaagcggctaccgccattccggcaggcgccacacccgccatggcgcaatggttcgtcctg
aaaaaccagcatcccgatgcgctgctgtttttccgcatgggcgatttctacgaactgttt
tttcaggatgcggaaaatgccgccgccacgctggatattcagctgacgaagcgcgggctg
catgaaggcgaaccgattcccatgtgtggcgtgccggtccatgccgccgagatgtatctg
tcccgactgatccgccgcggttggcgggttgccattgtcgagcagatggaaaaccccaaa
aaccgcgctggaaaaggcccgattcgccgcgatgtcgtacgtctggtgacccccggtacc
attaccgaggaaactttgctggatgcgggccgtcccaatctgctgctggccattacgcag
tccgggaatcgtctgggggcagcctggctggatatctccaccgggctgttcgagacggaa
tcactggacgaatccggcctgaccgccctgctgggccggctcgatccggcggaaattctc
tgcccctcttccctgcatctggaaatgtgggatgcacggcgcggaccggaacaaccggtc
agcgacccggccaatgccagggcacgactcgctgaagcatacgatgtcagccatatcaac
gtattcggcagctttaccgatgccgaggccatggcggccatgcaggcgctggattacgtg
cgggatgcacagatgggggctttgcctcgcctcggtcatcccgtgccggtgggcgaggcc
gggcgactggccatggatgcctccacccgcgccagtctggagatcgaccgcgcccgcgat
ggcggcaccgaacgcactttgctgtccgctgttcagcgcaccctgaccccggctggcggc
agaatgctcgccgcatggctgggtgctcccttgaccgaccgaacagtcatcaccgcccga
caggatggatggggctggctgctggaacagccgactttgtccatgcgcctgcgggaaact
ctgcggggctgccccgatatggcccgcgcgctggggcgtatcgcgctgggacgcggcacg
cctcgcgatctggccgccattcgcgatggtgcacacattgccatggaagccgccggattg
ctggaaggcatcctgccctccgcactggctgaattacacgccgccctgcatctgccaccc
gatctgccggaaatgctggaggcggcgctcgccgatccagtacccgctcgcatcgaggat
ggcggcgtaatcgccagcggcttcgacggggaactggatgccgaacgcgggctgcgggat
gacagccgcaaggtcatcgccgcacttcagaccgaatacgcccagcgctatggcgtcgcc
agcctcaagatccgtcatcacgcgcaactcggttacatgatcgaagtgcctgccgtcgcg
gtggaaacactgcggacggtgccggagttgatcctgcggcaaggcatggccaacggggca
cgctttacccatccggacctgtcggagctggaccgacgcattaccgaggccgccgaacgc
gcccggcaacgggaaatgatcgtcatcaccgccctgcggcaaaaggtggaggcccatgcc
ggttccatcgccgcctgcgccgaggcgctggcccgtctggacgtgctgcaatccgctgcc
cgtctggcggaaagcggcacatggtgccgccccgtcatgaccgatgaccagacgctgact
atcgaggccggacgccatcccgtggtggaagcagccctggaaggcggtccgacccccttt
atgcccaacgatacggatctgtccgccagcagacgcgtcatgctgctgaccgggccgaat
atggcgggcaaatccacctatctgcggcagaacgccctgattgtcattctggcgcaggcg
ggactaccggttccggccagagcagcccatatcggtattgtagatcgcctgttcagccgg
gtcggcgcgtcggatgatctggcacgcgggcaatcgactttcatggtcgaaatgactgaa
accgccgccattctgcatcaggcgggtccccgttccctggtcgtcgtggatgaaatcggg
cgtggcacctccacgctggatggtctggccatcgcctgggcagtgctggaagccctgcat
agccgtatcggcgcacgcacgattttcgccacccatttccacgaactggcgcgcctgcaa
ggggaactgccgatgctgcgcccctatacaatgaaagtgcaggaatggcgcggtaaggtc
gtgtttctgcatgaagtggcggaaggggccggaggacgaagctggggtgtccatgtcgcg
aaactggctggtgtgcctgccgccaccgtccgcagggccggacagttgctcacggcactg
gaggaacgttccgtcgggctgaccgataacgcgactctgcccctgttcgccgccagccat
ggcaacgaaacagagacagagccggcagaaggcattcatgaagcaaaacccgcctctcta
ccgccggaattgatcgaggcactgggtcagatggaaccggataaactcactccacgcgaa
gcactcgatcttatgtatcattttaagtctatgctttcttcgcaggcgcacaatggcgat
gtagaagcggaatcatggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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