KEGG   Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_1179
Entry
GbCGDNIH2_1179    CDS       T03083                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
gbh  Granulibacter bethesdensis CGDNIH2
Pathway
gbh03420  Nucleotide excision repair
gbh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gbh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GbCGDNIH2_1179
   03430 Mismatch repair
    GbCGDNIH2_1179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gbh03400]
    GbCGDNIH2_1179
Enzymes [BR:gbh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GbCGDNIH2_1179
DNA repair and recombination proteins [BR:gbh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GbCGDNIH2_1179
   MMR (mismatch excision repair)
    Other MMR factors
     GbCGDNIH2_1179
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C AAA_30 AAA_22
Other DBs
NCBI-ProteinID: APG30656
Position
1356633..1358399
AA seq 588 aa
MAEEVENPADAAGRVALERMFACLDNGHSFRLEAGAGAGKTYSLDKALRRLIDRRGAELL
RRGQQVGCITYTNVAKDEIISRIQAHPAVRTETIHGFCWSVLQDFQSTLRALVPALESWA
ERLEPVGGIGTRRVHYELGYPSVGDHQVTLRHEDVLALMIQALAYPKFRAVLTARYPILL
IDEYQDTDADFVNAIKARFLDAGQGPQLGLFGDHWQKIYGEGCGLVEHASLDVIDKNANF
RSTDPIVQVLNRMRPALPQMVRDPTLPGEARVFHTNLWPGVRRTGQGGGHWTGDTSPEAA
KAYFAHIKHRLAAEGWDLAVGKTKILMLSHSVLAREQGYSSIPPIYGQFNDPWLKKDDPH
IKFLADQLEPACAAFTAKRYGEMFECFGTGTPKIRKHADKVAWTDAMTTLIALRTSGTIG
EVVDFIAAQPHMRLPGQVEDAEKRLADVGPDAVEGESRRVTQLRKLRAVPYVELIALDRF
IDGYTPFATKHGVKGAEFENVLVIVGRGWNKYNFGQMLEWIEPGPPADKTDFFENNRNLF
YVACSRPKVRLALLFTQVLSANAMARLTAWFGADNIVALPADPGGVPA
NT seq 1767 nt   +upstreamnt  +downstreamnt
atggctgaggaagtagaaaatccagccgacgccgccgggcgagttgcgcttgagcgaatg
tttgcgtgtctcgacaatgggcacagcttccgtctggaggctggcgccggggctggcaaa
acctactcgcttgacaaggctcttcgccgcctaatcgatcgccgaggtgccgagctgctt
cgtcgcggccagcaagtcggctgcatcacttacaccaacgttgccaaggacgagatcatc
tctcgcatccaggcccatccggcggtgcggaccgagacgatccacggcttttgttggtct
gtcctgcaggacttccaatcgacactgcgtgcgcttgtccccgcacttgaaagctgggca
gagcgtctcgaacctgttggcggcattggtacccgccgtgtccactacgagctgggatac
cctagcgtcggcgaccatcaggtgacgcttcggcatgaagacgttctcgcgctgatgatt
caagcgcttgcttatccgaaatttcgagcggttctgaccgcgcgctatcccatccttctc
atcgacgaataccaggacaccgatgccgacttcgtcaatgcgatcaaggcccggttcttg
gacgcgggccaaggcccgcagctaggcttgttcggcgatcactggcagaagatctatggt
gagggctgtggtctggtcgagcacgcgagtctggacgtgatcgacaagaatgcaaatttc
cgatccaccgacccgattgtccaagttctcaatcggatgcggccagctttgccgcaaatg
gtgcgagatcccaccttgccgggtgaggcgcgcgtgtttcacaccaacctttggccgggc
gtcaggaggaccggacaaggtggtggccactggacgggcgatacaagccccgaggcggcg
aaggcatattttgcgcatatcaagcataggctcgcggccgagggctgggacctcgcggtc
ggaaaaaccaagattctcatgctcagccatagcgttctcgcacgcgagcagggctattcg
agcatcccgccgatctatggccagttcaacgatccttggctgaaaaaggacgatccacac
atcaagtttctggccgaccagttggagcccgcttgcgccgccttcacggcgaagcgttac
ggcgaaatgttcgaatgcttcggtactgggacgcctaaaatccgtaagcatgcggacaag
gttgcttggacggatgccatgaccacgttgatcgcgctacgcacgtcggggacgatcggc
gaggttgtcgatttcattgcagcgcagccgcacatgcgtcttcctgggcaagtggaagat
gcggagaagcgactggccgatgttggccccgacgcggtggaaggagagtcccgacgcgtg
acccagcttcgaaagctgcgtgcggtcccatatgtcgaactgatcgcccttgaccgcttc
atcgacgggtatacccccttcgccaccaagcatggcgtcaagggcgcggaatttgagaac
gtcctggtgatcgttggccgcggatggaacaaatataatttcggccagatgctcgaatgg
atcgagcctgggccacccgctgacaaaaccgatttctttgagaacaaccgtaatctcttc
tacgttgcatgctctcggcctaaggtccgtctggccctcctgtttacgcaagtgctcagt
gcaaatgcgatggcgcgactcacggcttggtttggagctgacaacattgtggccctgcca
gcagatcctggtggcgtgccggcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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