KEGG   Citrifermentans bemidjiense: Gbem_0345
Entry
Gbem_0345         CDS       T00749                                 
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
  KO
K03583  exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
Organism
gbm  Citrifermentans bemidjiense
Pathway
gbm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gbm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Gbem_0345 (recC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gbm03400]
    Gbem_0345 (recC)
Enzymes [BR:gbm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Gbem_0345 (recC)
DNA repair and recombination proteins [BR:gbm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Gbem_0345 (recC)
SSDB
Motif
Pfam: Exonuc_V_gamma RecC_C
Other DBs
NCBI-ProteinID: ACH37376
UniProt: B5EAR7
Position
complement(424197..427421)
AA seq 1074 aa
MPLKIYTSNRMERLVDELERVVRAPRPAPCTPFDKELVVVQNKGMQRWLSMELATRIGVW
ANGDFLFPNKFVEEVFAYVLPESPADAPLFAPEVMTWRILELLQQSAGRAGFEEVAGYLA
DDGDGLKRMQLARRISDTFDRYTIYRPKELLRWEQGEEEHWQAQLWRALNDRAGQKHRAR
LLHDFLASRKNDRSWRRRISVIGIPSLPPFHLDVLAKVAEHAEVNLFLLNPCRQYWGEIV
SERELARLEKHGQGEEQWYETGNPLLASWGKLGRDFFKAIIDDCGDHEREDSFYELPQGV
LLHEVQADIVELRGAEAGPRQVQAGDLSLKIHSCHSPMREVEVLYDTLLSLFDADPLLSP
RDVLVMTPDIEAYAPYISAVFDNPEEDRKRIPYSIADRSLKNEGEAARALVAILGLCGGR
YGVATVLDILESPPVARRFGLSGDDLENVRDWLRGANIRWGIDASQRAEHGVPPFSENSW
AAGLDRLLLGYAMNGDGRSFYNGILPYDDMEGGVALSFGRFLTFCEKLFAQTGALSRPRV
PSEWVPALRQILDDFILPDQEGEREFLLLIEMAKKLGEFPAAAGFEEEIGIEVVRYWVEQ
QLGASKRDLGFLTGNVTFCAMLPMRSIPFPVVALLGMNEGEFPRRNPPQGFDLMTREPRS
GDSSPRDEDRYLFLEALLSARKRLHISYVGQSIKDNAELPPSVLVSELLDYLERAFVTPE
GKPAAEVARHPLQPFSLQYFNRDSALFSYSQQNCEGAKAKLSSPTPREPFLDAPLPAWEE
EGTVTLKTLIDFLCNPAKELLRRRLGIRIEQGVEPLEESEPFALDTLAKYQLEQEMVTAL
LRGEELDTPYAVACARGDLPPGVCGSALFRKLGEPAQEFAAKVVEASDGEPLPPLDIDLV
LPGGRIIGRIENLRTDRMVRYRYTKLKAKDQLRLWVEHLALNCAKAEGYPLESSFVASDS
TIHLPPVEACTEHLDRLLELYRMGMTCPLKFFPESSLEYAKKSRDPKKAAKALADALGKW
HGSEFYEGEGKDEHCRRCFGDDAPLDEEFATLALQVWEPLLELQKAKGKGKDRL
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgccgctgaagatatataccagcaaccgcatggaacgcctggtggacgagctggaaagg
gtggtccgcgccccccgtcccgccccctgcacccccttcgacaaggaactggtcgtggtg
cagaacaaggggatgcagcgctggctctccatggaacttgccacccgcatcggcgtctgg
gccaacggcgacttcctctttcccaacaagttcgtggaagaggtcttcgcctacgtgctc
ccggagagccccgcggacgctccgctcttcgccccggaggtgatgacctggaggatcctg
gagctgctgcagcagtccgccggaagagccggcttcgaggaggtcgccgggtacctcgcg
gacgacggtgacggcctcaagcggatgcagttggcccggcgcatttcagacaccttcgac
cggtacaccatctaccgtcccaaagagctgctccgctgggagcagggggaagaggagcac
tggcaggcgcagctctggcgggctctcaacgaccgcgccggccaaaagcaccgcgcccgg
ctgctgcacgacttcctcgcttcccgcaaaaatgaccggtcctggcggcggcgcatctcg
gtgatcggcattccctcgcttccccccttccacctcgacgtacttgccaaggtggcggag
cacgccgaggtcaacctgttcctcttgaacccctgccgccagtactggggcgagatcgtc
tccgagcgggagctggcccggctggagaagcacggccagggggaggagcagtggtacgag
accgggaacccgctccttgcctcgtgggggaagctcggccgcgacttcttcaaggcgatc
atcgacgactgcggcgaccacgagagggaggacagcttctacgagcttccgcagggggtg
ctgctgcacgaggtccaggcggatatcgtggaattgcggggcgccgaggcggggccgcgc
caggtgcaggcgggcgacctctccctcaagatccattcctgccactccccgatgcgcgag
gtggaggtcctgtacgacacccttctctccctcttcgacgccgaccccctgctgtccccc
cgcgacgtgctggtgatgaccccggatatcgaagcttacgccccctacatctccgcggtc
ttcgacaatccggaagaagatcgcaagcgcatcccctattccatcgcggacagaagcctg
aagaacgagggggaagcagcccgtgcccttgtcgccatcctcgggctttgcggcggccgc
tacggcgtggcgaccgtgctggacatcctggagtcccctccggtagcgcgccggttcggg
ctctccggcgacgacctggaaaacgtgcgggactggctcaggggggccaacatcaggtgg
ggcatcgacgcctcccagcgcgcggagcacggcgtcccccctttcagcgaaaactcgtgg
gcagcggggctcgaccggctgcttttgggctacgccatgaacggcgacgggcgctcgttc
tataacggcatactcccctacgacgacatggagggtggcgtggcgctctccttcgggcgc
ttcctcaccttctgcgaaaagcttttcgcccaaaccggggcgctttcccgtccgcgcgtg
ccgtccgagtgggtgcctgcgctgcgccagatcctggacgacttcatcctcccggaccag
gaaggggagcgcgagttcctcctcctgatagagatggcgaagaaactgggggagtttccc
gctgcggccggtttcgaggaagagatcggcatcgaggtggtgcgctactgggtcgagcag
cagttgggggcctcgaaaagggacctcggctttctcaccggcaacgtcaccttctgcgcc
atgctcccgatgcggagcatcccctttccggtggtcgccttgttggggatgaacgagggg
gaattcccgcgccgcaacccgccccaggggttcgacctgatgaccagggagccgcgctcc
ggcgactcgtccccgcgggacgaggaccgctacctcttcctggaggccctcctctccgcc
cgcaagaggctgcatataagctacgtggggcagagcatcaaggacaacgccgaactcccc
ccgagcgtgctcgtgagcgaacttctggactacctggaacgcgctttcgttacgcctgag
ggtaagccggccgcagaagtagcgcgccatccgctgcagcctttcagtctccaatacttc
aaccgcgactccgcacttttcagctactcgcagcaaaactgcgagggggcgaaagcaaag
ctctcctcccccactccacgggagccgtttctggatgcgccccttcccgcctgggaggaa
gaagggaccgtcacgctcaagacgctgatcgatttcctctgcaaccccgccaaggagctg
ttgcggcgccggctcggcatccgcatcgagcagggggtggagccgctagaggaatcggag
cccttcgcgctggataccctcgccaagtaccaactggagcaggagatggtcacggccctc
ctgcgcggagaggagctcgacaccccttacgccgtcgcctgcgcgcgcggcgaccttcct
cccggagtctgcggctcggcccttttccgcaagctcggcgaacccgctcaggagttcgcc
gccaaggtggtcgaggcgtcggacggtgagccgctccctcccctggacatcgacctggta
cttcccggcgggaggatcatcgggcgcatcgaaaacctacgcaccgaccggatggtgcgc
taccgctacaccaagctgaaggcgaaagaccagctgcggctctgggtcgagcacctggcg
ctcaactgcgcgaaggccgaagggtatccgctggaaagcagcttcgtcgcctcggacagc
accatccacctcccccccgtcgaggcatgcacggagcacctggaccggctcctggagctg
taccgaatgggaatgacctgcccgctcaagttcttcccggagagctccctggagtacgcc
aagaaatcgcgcgacccgaagaaggcggcgaaggcgctcgccgatgcgctgggcaagtgg
cacggcagcgaattttacgagggcgagggaaaggacgagcactgccgccgctgcttcggc
gatgacgcgccgctggacgaggagttcgcaaccctggcgctccaggtatgggagccgctt
ctggagctccagaaggccaaggggaagggcaaagacagactctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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