KEGG   Citrifermentans bremense: GEOBRER4_11770
Entry
GEOBRER4_11770    CDS       T07006                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
gbn  Citrifermentans bremense
Pathway
gbn00740  Riboflavin metabolism
gbn01100  Metabolic pathways
gbn01110  Biosynthesis of secondary metabolites
gbn01240  Biosynthesis of cofactors
gbn02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gbn00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    GEOBRER4_11770 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GEOBRER4_11770 (ribD)
Enzymes [BR:gbn01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     GEOBRER4_11770 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     GEOBRER4_11770 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD CAF1-p150_N
Other DBs
NCBI-ProteinID: BCG46427
UniProt: A0A6S6LWL7
Position
1364058..1365167
AA seq 369 aa
MSDLHLKMMRLALAEARKGVGKTAPNPAVGCVIVRDGEVVGRGWHKKAGTPHAEVHALAA
AGAKAAGADAYVTLEPCSHFGKTPPCAKALIEAKVARVFVAMVDPNPRVSGRGIEMLREA
GIAVEVGLLAEESRELNLPFIKWIQTRLPFVVLKSALTLDGKSATVSGDSKWVTGDRARR
EVHRLRGRLDAIMVGVGTVVKDDPLLTCRVPGGKDPLRVIVDSTLRIPLHAAILDVQSKA
GTVIATCSADQAKMEALRARGAEVLSCRETDGRVDLTDLFAQLGARGVQSMLLEGGSHLA
GATLRAGLIDKCMIFLAPKLVGGAGMGLFAGEGAFLMADAIALEEVRVKRVGVDLLVEGI
PVKPKSQNH
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgtctgacctacaccttaaaatgatgcggctcgcgcttgccgaggcgagaaagggagtc
ggcaagaccgcccccaaccccgccgtcggctgcgtcattgtccgcgacggcgaggtggtc
gggcgcggctggcacaagaaggcggggaccccgcacgccgaggtgcatgcacttgccgcc
gccggcgcgaaggcggccggtgccgacgcctacgtgacgctcgagccctgctcccacttc
ggcaagacacctccctgcgccaaggcgctcatcgaggcgaaagtggcccgggtcttcgtg
gccatggtcgaccccaacccgcgggtctccggcaggggaatagagatgctccgggaggcg
gggatagcggtcgaggtcgggcttttggcagaggagagccgcgagctgaacctccccttc
atcaagtggatccagaccaggctccctttcgtagtgctgaagagcgcgctgactttggac
ggcaaaagcgcgacggtaagcggcgattccaagtgggtgaccggcgaccgtgcccggcgc
gaggtgcaccggctgcgcgggcgcctcgacgccatcatggtcggcgtcggaaccgtggtg
aaggacgatccccttctgacctgcagggtccccggcggcaaggacccgctgcgggtgatc
gtcgactcgaccctgaggataccgcttcatgcagcgatcctcgatgtgcagtcgaaagcc
ggaaccgtcatagccacctgcagcgcggaccaggcgaagatggaggcgctcagggcgcgc
ggcgccgaggtcctcagctgccgcgagacagatggacgtgtcgatctcaccgaccttttc
gcgcagctgggggcgcgcggcgtgcagtccatgctgctcgaaggtggcagtcacctggcg
ggcgcaacccttcgtgccgggctcatcgacaaatgcatgatcttcctggcgccgaagctc
gtgggaggggccggcatgggactcttcgcaggagagggggcgttcctcatggcggacgcc
atcgctctcgaagaggtgagggtaaagcgggtgggggtcgacctcctggtggaaggcatc
ccggtaaaaccaaaaagtcagaaccattag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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