KEGG   Gordonia bronchialis: Gbro_0578
Entry
Gbro_0578         CDS       T01102                                 
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
gbr  Gordonia bronchialis
Pathway
gbr03030  DNA replication
gbr03430  Mismatch repair
gbr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Gbro_0578
   03430 Mismatch repair
    Gbro_0578
   03440 Homologous recombination
    Gbro_0578
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gbr03032]
    Gbro_0578
   03400 DNA repair and recombination proteins [BR:gbr03400]
    Gbro_0578
Enzymes [BR:gbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Gbro_0578
DNA replication proteins [BR:gbr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Gbro_0578
DNA repair and recombination proteins [BR:gbr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Gbro_0578
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA AAA_22 AAA_16 Mg_chelatase EccE
Other DBs
NCBI-ProteinID: ACY19906
UniProt: D0LEI8
Position
616039..617334
AA seq 431 aa
MTSVFDRLTGQTAIADDLRSAARAARGLANRLDEGDVGAESMFADTAEQADDVCDAASRA
SMTHSWLFTGPPGSGRSVAATCFAAALQCQADDPADIGCGQCRACVTVMAGTHADVRSIA
PDGLTLSVKSMREIVQTASRRPGTGRWQIVIVEDADRLTEQAANALLKVVEEPPSRTVFL
LCAPSVDPDDISVTLRSRCRHVALTSPSVADIERVLVDRDGIDPAQAAWAASVCGGHIGR
ARRLATDADAREQREMALRLARAATVDSTAYKAAEELVRTAEAASKAIAAELNEPELEEM
KTALGAGGTGKGTARAPRGSAGAIKELEKRQKSRETRVGRDVLDRALVDLAALFRDALVV
GVGAQVTPMHPDKADDVVIPMAGFARPEQLLQCVEAVLACREALDVNVKPKFAVDAMVAS
IGLAMRRNASA
NT seq 1296 nt   +upstreamnt  +downstreamnt
gtgacaagtgtcttcgatcggctgacgggtcagacggccatcgccgacgatctgcgatcg
gccgcccgggccgcccgcggcctcgccaatcgcctcgacgagggtgacgtcggggcggag
agcatgttcgccgacaccgcagagcaggccgacgacgtctgcgacgcggcctcacgcgcc
tcgatgacgcactcctggctgttcaccgggccacccggcagcggtcggtcggtggcggcc
acctgtttcgcggccgcgctgcaatgccaggccgacgacccggccgacatcggctgcggg
cagtgccgggcctgcgtcaccgtgatggccggcacccacgccgacgtgcgcagcatcgcc
cccgacggtctgacattgtcggtgaagtcgatgcgcgagatcgtgcagacggcgtctcga
cggccgggcaccggacgctggcagatcgtcatcgtcgaagacgccgaccgtctgaccgag
caggcggccaacgcgctgctgaaggttgtggaggagccgccgtcgcggaccgtgttcctg
ctgtgcgcaccgtcggtggaccccgacgacatctcggtcacgctgcggtcgcgttgccgg
catgtcgcgctgacgagcccgtcggtggccgacatcgagcgggtgctggtcgaccgcgac
ggcatcgatccggcccaggccgcgtgggccgcgtcggtctgtggcggtcacatcggtcgc
gctcggcgcctggccaccgacgccgacgcgcgcgaacaacgcgagatggcactgcggctg
gcccgcgcggcgaccgtcgactcgaccgcctacaaagccgccgaggaactcgtccgcacc
gccgaggccgcgtccaaggcgatcgccgccgaactcaacgagcccgaactcgaggagatg
aagaccgcgctcggcgccggcggcaccggtaagggcaccgcccgcgcgccccgcggcagt
gccggtgcgatcaaggaactcgagaagcggcagaagtcgcgggagacccgcgtcggccgg
gacgtcctcgaccgcgcgctcgtcgacctcgccgccctgttccgtgatgcgctggtggtg
ggtgtcggggcgcaggtgacaccgatgcacccggacaaggccgacgacgtcgtcatcccg
atggccggcttcgcccgccccgagcaactcctgcaatgcgtcgaggccgtgctggcctgt
cgtgaggctctcgacgtgaacgtcaaacccaagttcgcggtggacgcgatggtcgcgagt
atcggacttgccatgcggcgcaacgcttctgcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (30)   

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