KEGG   Gordonia bronchialis: Gbro_1900
Entry
Gbro_1900         CDS       T01102                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
gbr  Gordonia bronchialis
Pathway
gbr00300  Lysine biosynthesis
gbr00470  D-Amino acid metabolism
gbr01100  Metabolic pathways
gbr01110  Biosynthesis of secondary metabolites
gbr01120  Microbial metabolism in diverse environments
gbr01230  Biosynthesis of amino acids
Module
gbr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:gbr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Gbro_1900
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Gbro_1900
Enzymes [BR:gbr01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Gbro_1900
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ACY21155
UniProt: D0L9G7
Position
1993700..1995121
AA seq 473 aa
MNAHPAGPRHAELLAAPHLAQRPNDPSVLAEIPANVFPRNAARNADGELEIAGVGVSELA
DKYGTPVFLVDEADFRSRCADMMSAFGPYGRVHYASKAFLCTEVARWVNEEGLSLDVCSG
GELAIALRAGFPPERIALHGNNKSVAELTAALDAGVGHVVLDSFVEIERLDALAGERGVV
ADVLVRVTVGVEAHTHEFISTAHEDQKFGFALAGGVAMDAVRRVFATDNLRLVGLHSHIG
SQIFDMDGFELAAHRVLGLLHDVVAEFGVDKTAQMSIVDLGGGLGISYLPEERPLPVGTV
AEKLAEIVRRESSAVGLPMPTIAVEPGRAIAGPGTVTLYRVGTIKDVALGGGSVRRYVSV
DGGMSDNIRTVLYQAEYDVRLVSRVSTARAVVSRVVGKHCESGDIVIKDCWLPEDLEPGD
LIAVAATGAYCYSMSSRYNMAMRPPVVAIADGADRMLLRRENIDDFFSLEVTQ
NT seq 1422 nt   +upstreamnt  +downstreamnt
gtgaacgcgcatcccgccgggccccggcacgccgaactcctggctgcgccgcatctggcg
cagcggcccaatgacccgtcggtgctcgccgagatcccggcgaatgtcttcccgcgcaac
gcagctcgcaacgctgacggtgaactggagatcgccggtgtcggggtgtccgagctcgcc
gacaagtacggcacgccggtgttcctggtcgacgaggccgatttccggtcacgctgcgcg
gacatgatgtcggccttcggtccgtacggacgagttcactacgcgtccaaggccttcctg
tgcaccgaggtcgcgcgctgggtgaacgaggagggactgtcgctcgacgtgtgctccggc
ggtgaactcgcgatcgcgctacgtgccggcttcccgcccgagcggatcgcgttgcacggc
aacaacaagagcgtcgccgaactcaccgcggccctggacgccggggtcggtcacgtggtg
ctggactcctttgtggagatcgaacgactcgatgcgctggccggcgaacgcggtgtggtc
gccgacgtgctggtccgggtcaccgtgggagtcgaggcacacacacacgaattcatctcg
acggcgcacgaggatcagaagttcggtttcgccctggccggcggggtcgccatggatgcg
gtgcgccgggtgttcgccaccgacaacctgcggttggtcgggttgcacagtcacatcggc
tcgcagatcttcgacatggacggcttcgaactcgccgcccaccgggtgctcggtctgcta
cacgacgtggttgccgagttcggtgtcgacaagaccgcacagatgtcgatcgtggatctc
ggtgggggactgggcatctcgtacctgcccgaggagcgtccgctgccggtcggcaccgtc
gcggaaaagctggcggagatcgttcgccgcgaatcatcggccgtcggactgccgatgccc
accatcgcggtggaaccgggccgcgccatagccggtcccgggaccgtgacgctgtatcgc
gtcggcaccatcaaggacgtcgccctcggcggcggctctgtccgtcgctacgtgtcggtc
gacggcggcatgagcgacaacatccgcaccgtcctctatcaggccgaatacgacgtgcgc
ctggtgtcgcgggtgtccaccgcgcgtgccgtggtcagtcgcgtcgtcggaaagcactgc
gagagcggcgacatcgtgatcaaggactgctggctgcccgaggatctggagcccggcgat
ctgatcgcggtggcggcgaccggcgcgtactgctattcgatgtcgagtcgctacaacatg
gcgatgcgcccgccggtggtcgcgatcgccgacggagcagaccgaatgctgttgcgccgc
gagaacatcgacgatttcttcagcctggaggtgacccagtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (6)   
   KEGG MODULE (4)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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