KEGG   Gordonia bronchialis: Gbro_2865
Entry
Gbro_2865         CDS       T01102                                 
Name
(GenBank) excinuclease ABC, B subunit
  KO
K03702  excinuclease ABC subunit B
Organism
gbr  Gordonia bronchialis
Pathway
gbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Gbro_2865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gbr03400]
    Gbro_2865
DNA repair and recombination proteins [BR:gbr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Gbro_2865
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Gbro_2865
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_16 AAA_5 UB2H DUF87 AIG1 Helicase_RecD HEM4 DUF4167
Other DBs
NCBI-ProteinID: ACY22078
UniProt: D0L9R3
Position
complement(3065670..3067826)
AA seq 718 aa
MAFAAEHPVLAHSEFRPVGEIVRTGGKFEVVSEYEPAGDQPEAIDDLERRIRGGEKDIVL
LGATGTGKSATTAWLIERVQRPTLVMAPNKTLAAQLANELREMLPNNAVEYFVSYYDYYQ
PEAYIAQTDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQSYLDR
SVEVEVGANIDRDALLRLLVDVQYTRNDQSFTRGGFRVRGDTVEIIPSYEELAVRIEFFG
DEVEALYYLHPLTGDVVRQVDSLRIFPATHYVAGPERMERAMTSIEAELEERLADLEGKG
KLLEAQRLRMRTTYDLEMMRQVGFCSGIENYSRHIDGRAAGSAPATLIDYFPDDFLLVID
ESHVTVPQIGGMYEGDMSRKRNLVEYGFRLPSAVDNRPLTWDEFVDRIGQTVYLSATPGP
YELGQANGEFVEQVIRPTGLVDPQVVVKPTKGQIDDLVHEIRERTERDERVLVTTLTKKM
AEDLTDYLLELGIRVRYLHSEVDTLRRVELLRQLRSGDYDVLVGINLLREGLDLPEVSLV
AILDADKEGFLRSTTSLIQTIGRAARNVSGEVHMYADTITDSMRNAIEETERRREKQVAY
NTEHGIDPKPLRKKIADILDQVYREADDDTVKVGGSGRNASRGRRAQGEVSKAGSAGVIE
KRDVSSMPRAELADLVAQLTDQMMNAARDLQFELAGRLRDEIADLKKELRGMDAAGIK
NT seq 2157 nt   +upstreamnt  +downstreamnt
atggcttttgctgctgaacacccggtcctcgcgcattcagagttccggccggtgggtgag
atcgtgcgcaccggcgggaagttcgaagtcgtcagcgagtacgaacctgccggtgaccag
cccgaggcgatcgatgacctcgaacgccgcatccgcggaggcgagaaggacatcgtgctg
ctcggtgccaccggcaccggtaagtcggccaccaccgcctggctgatcgagcgcgtacag
cgcccgacgctggtgatggcgcccaacaagacgctggccgcacagctggccaacgaactg
cgcgagatgctgccgaacaacgcggtggagtacttcgtctcctactacgactactaccaa
cccgaggcgtacatcgcgcagaccgacacctacatcgagaaggactcgtcgatcaacgac
gacgtcgaacggctccggcactcggccacgtcgagtctgctgtcccggcgggatgtggtg
gtggtggcgtcggtgtcctgtatctacggcctgggcaccccacagtcctacctcgaccgg
tccgtcgaggtggaggtcggtgcgaacatcgatcgcgatgcgctgctgcggctcctcgtc
gacgtgcagtacacccgcaacgatcagtcgttcacccgtggcgggttccgggtgcgcggc
gacacggtcgagatcatcccgtcctacgaggaactcgcggtgcgtatcgagttcttcggc
gacgaggtcgaggcgctgtactacctgcacccgctcaccggagacgttgtacgccaagtc
gattcgctgcgcatcttcccggccacccactacgtcgccggtccggaacgcatggaacgg
gcgatgacgagtatcgaggccgaactcgaggaacggctcgccgacctcgagggcaagggc
aaactgctcgaggcgcagcggctgcgcatgcgcaccacctacgacctcgagatgatgcgg
caggtcggcttctgctcgggtatcgagaactattcgcgtcacatcgacggacgggcggcg
ggcagcgccccggccaccctcatcgactatttccccgacgacttcctgctggtgatcgac
gaatcccatgtgaccgtcccgcagatcggcggcatgtacgagggcgacatgtcccgtaaa
cgcaacctcgtcgagtacgggttccgcttgccgtcggccgtggacaaccgcccgctcacc
tgggacgaattcgtcgaccgcatcgggcagaccgtgtacctctcggcgaccccgggcccc
tacgaactggggcaggccaacggtgagttcgtcgaacaggtcatccgcccgaccggcctg
gtggacccgcaggtcgtcgtgaaaccgaccaaggggcagatcgacgacctggtccacgag
atccgtgagcgcaccgaacgtgacgaacgcgtcctcgtgacgaccctgaccaagaagatg
gccgaggatctcaccgactatctgctggagctgggaatccgggtgcgctatctgcactcc
gaggtcgacacgctgcgtcgcgtcgaactgctgcggcagctccgctcgggcgactacgac
gtcctcgtcggcatcaacctcctccgtgaaggtctggacctgcccgaggtgtcgctggtg
gcgatcctcgacgccgacaaggaaggtttcctgcgtagcaccacgtcgctgatccagacg
atcggccgtgcggcccgcaacgtctccggcgaggtccacatgtacgccgacacgatcacc
gactcgatgcgcaatgccatcgaggagaccgaacgtcggcgggagaagcaggtcgcctac
aacaccgaacacggcatcgacccgaagccgttgcgcaagaagatcgccgacatcctcgac
caggtctatcgcgaagccgacgacgacaccgtcaaggtcggtggctcgggacgtaacgcc
agtcgcggccggcgtgctcagggggaggtgtccaaggcgggcagcgccggtgtcatcgag
aagcgcgacgtctcgtcgatgccgcgggccgaactcgccgacctggtcgcacagctcacc
gatcagatgatgaacgcggcccgcgacctgcagttcgagctggccgggcgtctccgcgac
gagatcgccgatcttaagaaggagctccgcgggatggacgcggccggcatcaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (26)   

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