KEGG   Gordonia bronchialis: Gbro_3558
Entry
Gbro_3558         CDS       T01102                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
gbr  Gordonia bronchialis
Pathway
gbr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Gbro_3558
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gbr03019]
    Gbro_3558
   03110 Chaperones and folding catalysts [BR:gbr03110]
    Gbro_3558
   03029 Mitochondrial biogenesis [BR:gbr03029]
    Gbro_3558
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gbr04147]
    Gbro_3558
Enzymes [BR:gbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Gbro_3558
Messenger RNA biogenesis [BR:gbr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Gbro_3558
Chaperones and folding catalysts [BR:gbr03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Gbro_3558
Mitochondrial biogenesis [BR:gbr03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Gbro_3558
Exosome [BR:gbr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Gbro_3558
  Exosomal proteins of other body fluids (saliva and urine)
   Gbro_3558
  Exosomal proteins of breast cancer cells
   Gbro_3558
  Exosomal proteins of colorectal cancer cells
   Gbro_3558
  Exosomal proteins of bladder cancer cells
   Gbro_3558
SSDB
Motif
Pfam: Cpn60_TCP1 GreA_GreB_N
Other DBs
NCBI-ProteinID: ACY22750
UniProt: D0LF55
Position
3780045..3781694
AA seq 549 aa
MAKELRYNAEARLRLERGVNALADAVKVTLGPKGRNAVLEKLTGPPTITNDGVTIAREIQ
LRDPFANMGAQLVKEVAMKTNGVVGDGTTTATVLAQAMVREGLRAVEQGANPMRVRRGIE
RAVAAVTDALAGQAVQIGGRGDLARIASLAASDDEVIGEVIATAVEHVGKNGVITTEESD
TLGLTVDVVDGIEFDHGYTSGYMVTNPERMEAVLDNPVVLLTNKKITAVQEIMPAIESAK
RADRPLLVLAEDVDGPALQLLVGGNMHKTMLSVVVRAPGFGHRRIAELEDLAVALGGHVV
AKDTGIELSEVSAEHLGTCDRVTVTENETTIVGAHGDQSLVDARVQHLEAQLQRARIDHD
RDSLELRIARLTGRVAVIRVGGVTSVELKERMLRVEDALAATRAAVEAGIVSGGGTALAQ
AHRALEPLEALGDEAVGIDVVRRSLAEPLFWIATNAGFDGDEVVKVVAGLPLGHGFNALT
GGYGDMFDEGVIDPCKVTRAALESAASIAALLITTETAVVEEVLGNPGAIPAPAVGDLAE
GMIRPSNIY
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggccaaagagttgcgctacaacgccgaagcgcggctacggctggagcggggcgtcaac
gccctcgccgacgccgtgaaggtgacgctgggccccaagggccgaaatgcggtgctggag
aagctgaccggaccgcccacgatcaccaacgacggtgtcacgatcgcccgtgagatccaa
ctccgggacccgtttgccaacatgggcgcccagttggtcaaagaagtcgcgatgaagacc
aacggggtggtcggtgacggcaccaccaccgcgacggtgctcgcgcaggccatggtccgc
gagggtctgcgtgccgtggagcagggtgccaacccgatgcgggtgcgccgcggcatcgaa
cgcgcggtggccgcggtgaccgacgcgctggccggccaggccgtccagatcggcgggcgc
ggcgacctggcccgcatcgcgagcctcgcggccagcgacgacgaggtgatcggcgaggtg
atcgccaccgccgtcgaacacgtcgggaagaacggtgtgatcaccaccgaggagagcgac
acgctcgggctgaccgtcgacgtggtggacggcatcgagttcgatcacggctacacgtcg
ggatacatggtgaccaatcccgaacgcatggaagcggttctggacaatccggtggtcctg
ctgaccaacaagaagatcaccgccgtccaggagatcatgccggccatcgagtcggccaaa
cgcgccgaccggcccctgctggtcctcgccgaagacgtcgacggacccgcactgcagttg
ctcgtcggcggcaacatgcacaagacgatgctctcggtggtcgtgcgcgcgcccggcttc
gggcatcggcggatcgccgaactcgaggatctcgcggtcgcgctcggcggtcacgtggtc
gccaaggacaccggtatcgaactgagtgaggtatcggccgagcatctcggcacgtgtgac
cgggtgacggtcaccgagaacgagaccaccatcgtcggcgcccacggcgaccagtcgctc
gtcgacgcccgtgtgcagcatctggaggcccagctgcagcgggcccggatcgatcacgat
cgcgacagtttggagttgcggatcgcgcggctgaccggccgggtcgcggtgatccgcgta
ggcggcgtgacaagcgtcgaactgaaggaacggatgctgcgggtggaggatgcgctggcc
gccacccgcgccgcggtcgaggccggcatcgtctccggcggcggcaccgcgctggcccag
gcgcatcgtgcgctcgaaccactcgaggcactcggcgacgaggccgtcggcatcgacgtc
gtccgccggtcgctggccgaaccactgttctggatcgccaccaacgccggattcgacggc
gacgaagtggtgaaggtggtggcgggtctcccgctcggacacggattcaacgcgctgacc
ggcggatacggcgacatgttcgacgagggtgtcatcgacccgtgcaaggtcacccgcgcc
gccctggagagtgccgcctccatcgccgcactgctgatcaccaccgaaacggcagtggtc
gaggaggttttgggcaatccgggtgcgatacccgcgcccgccgtcggcgatctcgccgaa
ggcatgatccgtccctccaacatctactga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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