KEGG   Gallionella capsiferriformans: Galf_2244
Entry
Galf_2244         CDS       T01295                                 
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
gca  Gallionella capsiferriformans
Pathway
gca03030  DNA replication
gca03430  Mismatch repair
gca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Galf_2244
   03430 Mismatch repair
    Galf_2244
   03440 Homologous recombination
    Galf_2244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gca03032]
    Galf_2244
   03400 DNA repair and recombination proteins [BR:gca03400]
    Galf_2244
Enzymes [BR:gca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Galf_2244
DNA replication proteins [BR:gca03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Galf_2244
DNA repair and recombination proteins [BR:gca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Galf_2244
SSDB
Motif
Pfam: RNase_T DUF5710
Other DBs
NCBI-ProteinID: ADL56248
UniProt: D9SIT5
Position
complement(2420315..2421226)
AA seq 303 aa
MTNRETTEALRLLDEHPDFKVIRRIMPRTTVGEPAGREMLRGVVVDTETTGINSAQDAII
ELGMVLFEYDPDTGEAGRVLGSFDQLEDPGMAIPPESTEVHGITDEMVQGKRIDDAAVAA
FLDGVSVVIAHNSKFDRVFLEKRLSVFETLPWGCSLAQVDWRAEGIGSAKLDYISYQYGF
FYEAHRAEGDCYALLEILQQPLPKSGQLVLKSILDGLAQKSYQVFATGSAFDTKDLLKAR
GYRWDGEKKCWHTTVAGDAAVKDEVVWLKEFVYGGKSARVEIEVHNCLTRYSNRRGNRAI
KEI
NT seq 912 nt   +upstreamnt  +downstreamnt
atgactaatagagaaaccactgaggcgctgcgcctgctcgatgaacatccggacttcaag
gtgatccggcgtatcatgccccgcaccaccgttggcgaacctgcgggccgggagatgttg
cgaggggttgttgtcgataccgaaaccaccgggatcaattctgctcaggacgccattatt
gaactgggcatggtgttgttcgaatacgatcccgatacgggggaggccgggcgggtgttg
ggcagtttcgatcaactggaagatcccgggatggcgattccgcctgagtcgaccgaggtg
cacggcattaccgatgagatggttcagggtaaacgcatcgacgatgctgcggtggcggcc
ttcctcgacggggtgagcgtggtgattgcacacaattctaaatttgaccgggtgtttctc
gaaaagcgcctgtctgtctttgagacgctaccctggggctgctctttggcgcaggtagac
tggcgtgcggaaggaatcggttctgccaaactcgattacatatcgtatcagtacgggttt
ttctatgaggcgcaccgcgccgagggagactgctatgcgttgctggaaatattgcagcag
ccgctgccaaaatcagggcagctggttttaaaatcgatcttggacggtttggcgcagaaa
agttatcaggtttttgcgaccggttcggcgttcgatacgaaagatctgttaaaggcgcgt
ggctatcgctgggatggcgaaaaaaaatgctggcacaccacggtcgcgggcgatgcggcc
gtgaaggacgaggtcgtctggctgaaggagttcgtttatggcggaaaaagtgcgcgcgtc
gaaatcgaagtacacaattgcctgacgcgttattccaaccgcaggggtaatcgggcgatc
aaagaaatttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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