KEGG   Gallionella capsiferriformans: Galf_2872
Entry
Galf_2872         CDS       T01295                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
gca  Gallionella capsiferriformans
Pathway
gca03030  DNA replication
gca03430  Mismatch repair
gca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Galf_2872
   03430 Mismatch repair
    Galf_2872
   03440 Homologous recombination
    Galf_2872
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gca03032]
    Galf_2872
   03400 DNA repair and recombination proteins [BR:gca03400]
    Galf_2872
Enzymes [BR:gca01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Galf_2872
DNA replication proteins [BR:gca03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Galf_2872
DNA repair and recombination proteins [BR:gca03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Galf_2872
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ADL56864
UniProt: D9SE42
Position
complement(3084993..3085607)
AA seq 204 aa
METVAVIDFETTGMSPELGDRATEVAVVIVSDGKISSRYQSLMNTGAYIPPFIEDLTGIS
NEMIRQAPPAAQVMKELADFVGAAPWVAHNASFDSRFLDAEWSRMGHRREQAFACSMLLA
RRLYPDSPNHKLGTLVRFLGLPDTARHHRALADAEMTAHLWLRMVSDLKNRQGLDVVTHE
FLRALQKVPKAKLPAYIAKFAHAA
NT seq 615 nt   +upstreamnt  +downstreamnt
atggagacggtcgcggtcatcgactttgaaaccaccggcatgtcgcccgagttgggcgac
cgcgcgacagaggtggcggttgtcatcgtgtcggacggaaaaatttccagccgttatcaa
agtttgatgaataccggcgcttacattcctccctttatcgaggacttgacgggaatcagc
aatgaaatgatccgtcaggcaccaccggccgcacaggtcatgaaggaattggctgacttt
gtcggggcggctccctgggtggcgcacaacgcctcattcgacagccggtttctggatgcc
gaatggtcgagaatgggtcatcgtcgtgagcaggcgttcgcctgttcgatgttgctggca
agaaggctatatcctgattcaccgaatcacaaactgggcacgttggtgagatttctcggc
ttgccggatacggcgcgccaccaccgtgcgctggccgatgccgaaatgaccgcgcatctg
tggctgaggatggtatctgaccttaaaaacaggcagggtcttgatgtcgtcacgcatgaa
tttttgcgcgcgctgcaaaaagtgcccaaagcgaagctacccgcttatatcgcgaagttt
gcgcacgcggcgtga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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