KEGG   Geobacillus sp. C56-T3: GC56T3_0817
Entry
GC56T3_0817       CDS       T01245                                 
Name
(GenBank) excinuclease ABC, C subunit
  KO
K03703  excinuclease ABC subunit C
Organism
gct  Geobacillus sp. C56-T3
Pathway
gct03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gct00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GC56T3_0817
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gct03400]
    GC56T3_0817
DNA repair and recombination proteins [BR:gct03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GC56T3_0817
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2 GIY_YIG_2 5_3_exonuc
Other DBs
NCBI-ProteinID: ADI25861
Position
871575..873347
AA seq 590 aa
MNERLKEKLAVLPEQPGCYLMKDRHGTVIYVGKAKSLKARVRSYFTGTHDGKTQRLVEEI
ADFEYIVTSSNAEALILEMNLIKKHDPKYNVMLKDDKSYPFIKITAEKHPRLLITRKVKK
DGGKYFGPYPNVQAANETKKLLDRLYPLRKCSTLPSRACLYYHMGQCLAPCVHPVSDEQN
KAMVEQIVRFLNGGYEDVKRELAEKMHEAAEALEFERAKEYRDQIAAIEMTMEKQKMMLN
DFIDRDVFGYAYDKGWMCVQVFFLRQGKLIERDVSIFPLYQDPDEEMLTFLGQFYAKAHH
LKPKEVVLPSDIDGELARELLGVAVVQPKKGKKKELVELASKNAAIALKEKFYFIERDEE
RTIKAVERLGERLGIPAPRRIEAFDNSNIYGADPVSALVVFLDGKPAKKEYRKYKVKTVA
GPNDYETMREVVRRRYTRVLKEGLPLPDLIIIDGGKGHLSAVRDVLENELGLDVPLAGLA
KDEKHRTSELLAGDPPDVVPLDRQSQEFYLLQRIQDEVHRFAVMFHRKTRQKTMFHSVLD
DIPGVGEKRKKALLNYFGSVKKMKEATVEELQRANIPRAVAEKIYEKLHE
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgaacgagcggctgaaagaaaagctggccgtgctgccggaacagccgggctgctatttg
atgaaagacagacacggaacggtcatttacgtcggcaaagcgaagtcgctgaaagcgcgc
gtccgctcgtattttaccgggacgcatgacggcaagacgcagcggcttgttgaggagatc
gctgatttcgaatacatcgtcacctcgtcaaacgccgaggcgctcattttggagatgaat
ttgatcaaaaagcatgatccgaaatacaacgtcatgctgaaagatgataaaagctacccg
tttattaaaatcaccgcggaaaagcatccgcgcctgcttatcacccgcaaagtgaaaaaa
gacggcggcaaatatttcggcccgtatccaaacgtgcaggcggcgaacgaaacgaaaaag
ctgctcgaccgcttatatccgctccgcaaatgttcgacgctgccttcgcgcgcctgtttg
tattaccatatgggccaatgccttgccccgtgcgtccacccggtgtcggacgaacaaaat
aaggcgatggttgaacaaatcgtccgctttttaaacggcgggtatgaagacgtgaagcgg
gagttggccgagaaaatgcacgaggcggcggaagcgctcgagtttgaacgggcgaaagaa
taccgcgatcaaatcgcggcgattgagatgacgatggaaaagcaaaaaatgatgctcaac
gacttcatcgaccgcgatgtattcggctatgcgtacgacaaaggctggatgtgcgtgcaa
gtgtttttccttcgccaagggaagctgattgagcgcgacgtgtcgatcttcccgctttac
caagacccggatgaggaaatgcttacgtttttgggtcagttttatgcgaaagcgcatcat
ttgaagccaaaagaagtcgtcctcccgtccgacattgacggcgagctcgcccgcgaattg
ctcggcgttgccgtcgtccagccgaaaaaagggaagaaaaaagagcttgttgagctggcg
agcaaaaacgcggccattgctctgaaagaaaaattttatttcatcgagcgggacgaagaa
cggacgatcaaagcggtcgaacgtctcggagagcgtcttggcattccggcgccgcgccgc
atcgaggcgtttgacaactcgaacatttacggggccgatccggtctcggcgctcgtcgtt
ttcctcgatggcaagccggcgaaaaaagaataccggaaatataaggtgaaaacggtcgcg
gggccgaacgattatgaaacgatgcgcgaagtcgtgcgccgccgctatacgcgcgtgttg
aaagaaggattgccgcttcctgatttgatcatcatcgacggcggcaaaggccacttgtcg
gcggtgcgggatgtgctcgaaaacgaacttggactggatgtgccgctggctggattggcg
aaagacgaaaaacatcgcacatcagagcttttggccggcgacccgccggatgtcgtgccg
cttgaccggcaaagccaagagttttatttattgcagcgcatccaggatgaagtgcatcgg
tttgccgttatgtttcaccgaaagacgcggcagaaaacgatgttccattccgtgcttgat
gacatccccggcgtcggggaaaagcggaaaaaagcgctcttgaattatttcggctcggtg
aaaaagatgaaagaggcgacggtggaagagttgcagcgggcgaacattccgcgagcggtg
gcggagaaaatctatgaaaaactgcatgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system