KEGG   Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI1816
Entry
GDI1816           CDS       T00631                                 
Symbol
xthA
Name
(GenBank) putative exodeoxyribonuclease III protein
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
gdi  Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    GDI1816 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gdi03400]
    GDI1816 (xthA)
Enzymes [BR:gdi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     GDI1816 (xthA)
DNA repair and recombination proteins [BR:gdi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     GDI1816 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: CAP55759
RhizoBase: GDI1816
UniProt: A9HIE6
Position
complement(1849785..1850597)
AA seq 270 aa
MIGNATHMRIVTWNINSLRLRLPLLARLGAELRPDIICLQETKVPDDLFPADAIRDLGYV
HIQHRGMKSYNGVAILSRVPLTPLDDTPDWCARSDCRHIAASFPMGGRPVELHNFYVPAG
GDIPDPDANPKFAHKLAFVDEATSWFTGRTSHRTILVGDLNIAPLEQDVWSHKQLLNVVS
HTPPEVTRLMAWQACGFVDAMRHFVPPDEKLYTWWSYRNRDWKASNRGRRLDHVWITPDL
TAALKDMTVLREARDWPTTSDHVPVAMDFA
NT seq 813 nt   +upstreamnt  +downstreamnt
gtgatcggcaatgccacacatatgcgcatcgtcacgtggaatatcaattcgcttcggctg
cggctgccgctgctggcccggctgggcgcggagctgcggcccgacatcatctgcctgcag
gagaccaaggtccccgacgacctgttccccgccgatgcgatccgcgacctgggctatgtc
catatccagcatcgcgggatgaaatcctataacggcgtcgccatcctgtcgcgcgttccg
ctgacccccctggacgacacgccggactggtgcgcccgcagcgactgccgtcacatcgcg
gcctcgttccccatgggggggcggccggtggaactgcataatttctacgtgcccgccggt
ggcgacatccccgacccggatgccaacccaaaattcgcccacaagctggctttcgtggac
gaagccacgtcctggttcacgggccgcaccagccaccgcaccatcctggtgggtgacctg
aacatcgccccgctggaacaggatgtgtggagccacaagcagctgctgaacgtggtcagc
cacaccccaccggaagtcacgcggcttatggcgtggcaggcctgcggcttcgtcgatgcg
atgcgccatttcgtgccgcccgacgagaagctgtatacgtggtggtcctaccgcaaccgc
gactggaaggcctccaatcgcggccgccgcctggaccatgtctggatcacgcccgacctg
acggcggcgctgaaggacatgacggtgctgcgcgaggcacgggactggcccacgacgtcg
gaccacgtgcccgtcgcgatggatttcgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system